as_SummarizedExperiment | R Documentation |
as_SummarizedExperiment() creates a 'SummarizedExperiment' object from a 'tbl' or 'tidybulk' tbl formatted as | <SAMPLE> | <TRANSCRIPT> | <COUNT> | <...> |
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
## S4 method for signature 'spec_tbl_df'
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
## S4 method for signature 'tbl_df'
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
## S4 method for signature 'tidybulk'
as_SummarizedExperiment(
.data,
.sample = NULL,
.transcript = NULL,
.abundance = NULL
)
.data |
A tibble |
.sample |
The name of the sample column |
.transcript |
The name of the transcript/gene column |
.abundance |
The name of the transcript/gene abundance column |
A 'SummarizedExperiment' object
A 'SummarizedExperiment' object
A 'SummarizedExperiment' object
A 'SummarizedExperiment' object
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