gate_int.numeric: gate_int

In stemangiola/tidygate: Interactively Gate Points

gate_int

Description

gate_int

Usage

## S3 method for class 'numeric'
gate_int(
  .dim1,
  .dim2,
  .color = NULL,
  .shape = NULL,
  .size = NULL,
  opacity = 1,
  how_many_gates = 1,
  .group_by = NULL,
  gate_list = NULL,
  ...
)

Arguments

.dim1	A column symbol. The x dimension
.dim2	A column symbol. The y dimension
.color	A column symbol. Colour of points
.shape	A column symbol. Shape of points
.size	A column symbol. Size of points
opacity	A number between 0 and 1. The opacity level of the data points
how_many_gates	An integer. The number of gates to label
.group_by	A column symbol. The column that is used to calculate distance (i.e., normally genes)
gate_list	A list of gates. It is returned by gate function as attribute \"gate\". If you want to create this list yourself, each element of the list is a data frame with x and y columns. Each row is a coordinate. The order matter.
...	Further parameters passed to the function gatepoints::fhs

Value

An integer vector, with 0 for elements outside gates and 1..N for the elements inside the N gates.

stemangiola/tidygate documentation built on Sept. 17, 2024, 10:43 p.m.