bodymapRat: Experimental dataset from the rat BodyMap project
In stephaniehicks/bodymapRat: Experimental dataset from the rat BodyMap project
Description
This package contains a SummarizedExperiment
from the Yu et al. (2013) paper that performed the
rat BodyMap across 11 organs and 4 developmental stages.
Raw FASTQ files were downloaded and mapped using STAR.
FlowSorted.DLPFC.450k data set from Bioconductor.
The purpose is to create an example object for the man
pages and vignette in this package.
The SummarizedExperiment object was created using
the /inst/scripts/make-data.Rmd and is downloaded from
ExperimentHub
Format
A SummarizedExperiment object with 652 RNA-seq
samples (columns).
Examples
1
2
3
library(ExperimentHub)
bm_rat <- bodymapRat()
dim(bm_rat)
stephaniehicks/bodymapRat documentation built on June 22, 2021, 6:32 a.m.
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Description
This package contains a SummarizedExperiment from the Yu et al. (2013) paper that performed the rat BodyMap across 11 organs and 4 developmental stages. Raw FASTQ files were downloaded and mapped using STAR. FlowSorted.DLPFC.450k data set from Bioconductor. The purpose is to create an example object for the man pages and vignette in this package.
The SummarizedExperiment object was created using the /inst/scripts/make-data.Rmd and is downloaded from ExperimentHub
Format
A SummarizedExperiment object with 652 RNA-seq samples (columns).
Examples
1 2 3 | library(ExperimentHub)
bm_rat <- bodymapRat()
dim(bm_rat)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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