API for stephens999/ashr
Methods for Adaptive Shrinkage, using Empirical Bayes

Global functions
ColsumModified Source code
VB.update Source code
VBfixpoint Source code
VBnegpenloglik Source code
VBpenloglik Source code
add_etruncFUN Source code
add_list Source code
ash Man page
ash.estmode Source code
ash.workhorse Man page Source code
ash_pois Man page Source code
ashci Man page
ashr Man page
ashr-package Man page
autoselect.mixsd Source code
calc_flash_data Source code
calc_lfdr Source code
calc_lfsr Source code
calc_logLR Man page Source code
calc_loglik Man page Source code
calc_mixmean Man page Source code
calc_mixmean.default Source code
calc_mixsd Man page Source code
calc_mixsd.default Source code
calc_np Source code
calc_null_loglik Man page Source code
calc_null_vloglik Man page Source code
calc_pm Source code
calc_pp Source code
calc_psd Source code
calc_qvalue Source code
calc_svalue Source code
calc_vlogLR Man page Source code
calc_vloglik Man page Source code
cdf.ash Man page Source code
cdf_conv Man page
cdf_post Man page Source code
cdf_post.default Source code
check_args Source code
check_lik Source code
comp_cdf Man page Source code
comp_cdf.default Source code
comp_cdf.igmix Source code
comp_cdf.unimix Source code
comp_cdf_conv Man page
comp_cdf_conv.default Source code
comp_cdf_conv.normalmix Man page
comp_cdf_conv.unimix Man page
comp_cdf_post Man page Source code
comp_cdf_post.default Source code
comp_cdf_post.igmix Source code
comp_cdf_post.normalmix Source code
comp_cdf_post.unimix Source code
comp_dens Man page Source code
comp_dens.default Source code
comp_dens.igmix Source code Source code
comp_dens.unimix Source code
comp_dens_conv Man page Source code
comp_dens_conv.default Source code
comp_dens_conv.igmix Source code
comp_dens_conv.normalmix Man page Source code
comp_dens_conv.unimix Man page Source code
comp_mean Man page Source code
comp_mean.default Source code
comp_mean.igmix Source code
comp_mean.normalmix Man page Source code
comp_mean.tnormalmix Man page
comp_mean.unimix Source code
comp_mean2 Man page Source code
comp_mean2.default Source code
comp_postmean Man page Source code
comp_postmean.default Source code
comp_postmean.igmix Source code
comp_postmean.normalmix Source code
comp_postmean.unimix Source code
comp_postmean2 Man page Source code
comp_postmean2.default Source code
comp_postmean2.normalmix Source code
comp_postmean2.unimix Source code
comp_postprob Man page Source code
comp_postprob.default Source code
comp_postsd Man page Source code
comp_postsd.default Source code
comp_postsd.igmix Source code
comp_postsd.normalmix Source code
comp_sd Man page Source code
comp_sd.default Source code
comp_sd.igmix Source code
comp_sd.normalmix Man page Source code
comp_sd.tnormalmix Man page Source code
comp_sd.unimix Source code
compute_lfsr Man page Source code
constrain_mix Source code
cxxMixSquarem Man page Source code
dens Man page Source code
dens.default Source code
dens_conv Man page Source code
dens_conv.default Source code
diriKL Source code
dlogf Man page Source code
do_truncnorm_argchecks Source code
effective.effect Source code
estimate_mixprop Man page
etrunclogf Source code
etrunclogf_denom Source code
etrunclogf_num Source code
extract_data Source code
fixpoint Source code
gen_etruncFUN Man page Source code
gen_etruncFUN_single Source code
get_density Man page Source code
get_exclusions Source code
get_fitted_g Man page Source code
get_lfdr Man page Source code
get_lfsr Man page Source code
get_logLR Man page Source code
get_loglik Man page Source code
get_name Source code
get_np Man page Source code
get_pi0 Man page Source code
get_pm Man page Source code
get_post_sample Man page Source code
get_pp Man page Source code
get_psd Man page Source code
get_qvalue Man page Source code
get_svalue Man page Source code
gradient Source code
igmix Man page Source code
initpi Source code
is_const Source code
is_normal Source code
lik_binom Man page Source code
lik_logF Man page Source code
lik_normal Man page Source code
lik_normalmix Man page Source code
lik_pois Man page Source code
lik_t Man page Source code
log_comp_dens_conv Man page Source code
log_comp_dens_conv.default Source code
log_comp_dens_conv.normalmix Man page Source code
log_comp_dens_conv.unimix Man page Source code
loglik Source code
loglik.default Source code
loglik_conv Man page Source code
loglik_conv.default Man page Source code
logscale_sub Source code
matrix_dens Source code
max_lim Source code
max_lim.default Source code
min_lim Source code
min_lim.default Source code
mixEM Man page Source code
mixIP Man page Source code
mixSQP Man page
mixVBEM Man page Source code
mixcdf Man page Source code
mixcdf.default Man page Source code
mixmean2 Man page Source code
mixmean2.default Source code
mixprop Man page Source code
mixprop.default Source code
my_e2truncbeta Man page Source code
my_e2truncgamma Man page Source code
my_e2truncnorm Man page Source code
my_e2trunct Man page Source code
my_etruncbeta Man page Source code
my_etruncgamma Man page Source code
my_etrunclogf Man page Source code
my_etruncnorm Man page Source code
my_etrunct Man page Source code
my_vtruncnorm Man page Source code
n_obs Source code
ncomp Man page Source code
ncomp.default Man page Source code
negpenloglik Source code
normalize Source code
normalmix Man page Source code
pcdf_post Man page Source code
penalty Source code
penloglik Source code
plogf Man page Source code
plot.ash Man page Source code
plot_dens Source code
plot_dens.default Source code
plot_diagnostic Man page
plot_post_cdf Source code
plot_post_cdf.default Source code
pm_on_zero Man page Source code
pm_on_zero.default Source code
post_sample Man page Source code
post_sample.default Source code
post_sample.normalmix Man page Source code
post_sample.unimix Man page Source code
posterior_dist Man page Source code
postmean Man page Source code
postmean.default Source code
postmean2 Man page Source code
postmean2.default Source code
postsd Man page Source code
postsd.default Source code
print.ash Man page Source code
prune Man page Source code
prune.default Source code
qval.from.lfdr Man page Source code
set_control_mixIP Source code
set_control_squarem Source code
set_data Man page Source code
set_optmethod Source code
set_output Source code
set_resfns Source code
setprior Source code
summary.ash Man page Source code
taildiff Source code
tnormalmix Man page
unimix Man page Source code
vcdf_post Man page Source code
w_fixpoint Source code
w_mixEM Man page Source code
w_negpenloglik Source code
w_penloglik Source code
xdtrunclogf Source code
stephens999/ashr documentation built on May 16, 2024, 3:10 a.m.