flash_get_ldf: Get LDF from a flash object
In stephenslab/flashr: Empirical Bayes Matrix Factorization

flash_get_ldf

R Documentation

Get LDF from a flash object

Returns standardized loadings, factors, and weights from a flash object.

flash_get_ldf(f, kset = NULL, drop_zero_factors = TRUE)

`f`	A flash fit object.
`kset`	Indices of loadings/factors to be returned.
`drop_zero_factors`	If `TRUE`, then any factor/loadings that are zero will be removed.

A list with the following elements. These are analogous to the u, d and v returned by svd, but the columns of l and f are not orthogonal.

`l`	A matrix whose columns contain the standardized loadings (i.e., with norm 1).
`d`	A vector of weights (analogous to the singular values in an SVD).
`f`	A matrix whose columns contain the standardized factors (i.e., with norm 1).