cutadaptPairedSummary: Extract Read Information From Cutadapt Log Files
In steveped/NGS2R: Provides access to some common NGS log files from within R
Description
Usage
Arguments
Details
Value
Author(s)
Description
Takes the output from cutadaptPaired and extracts key information
Usage
1
Arguments
x
The output from cutadaptPaired
Details
This will extract the read numbers, the numbers trimmed & the numbers discarded from each file in the paired reads.
If the log files are from a set of pairs, it will automatically detect this, and get the information for the entire set of paris
Value
A data.frame
Author(s)
Steve Pederson <stephen.pederson@adelaide.edu.au>
steveped/NGS2R documentation built on May 30, 2019, 5:38 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Details Value Author(s)
Description
Takes the output from cutadaptPaired and extracts key information
Usage
1 |
Arguments
x |
The output from |
Details
This will extract the read numbers, the numbers trimmed & the numbers discarded from each file in the paired reads. If the log files are from a set of pairs, it will automatically detect this, and get the information for the entire set of paris
Value
A data.frame
Author(s)
Steve Pederson <stephen.pederson@adelaide.edu.au>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.