plotAssayMerged-methods: Plot the assayData merged across replicate wells

In steveped/incucyteR: Process Incucyte Growth Curve Data

Description

Plot the assayData from an IncucyteExperiment object merged across replicate wells

Usage

plotAssayMerged(x, assay, ..., trans = "log10", pointsize = 1/3)

## S4 method for signature 'ANY'
plotAssayMerged(x, assay, ..., trans = "log10", pointsize = 1/3)

## S4 method for signature 'IncucyteExperiment'
plotAssayMerged(x, assay, ..., trans = "log10", pointsize = 1/3)

Arguments

x	An IncucyteExperiment object
assay	The assay to be visualised
...	Passed to aes_string(). If no colour, linetype or other grouping category is provided, the plot will simply be a summary of all points in all wells. Any provided categories must correspond to columns contained in the colData slot of x
trans	The transformation for the y-axis
pointsize	The size of points to be drawn

Details

Visualise all data from the requested assay merged by the column(s) passed to the line and point aesthetics

The returned object is a ggplot object and can be further modified using scales, themes and additional geoms.

Value

A ggplot object

steveped/incucyteR documentation built on Sept. 7, 2020, 12:22 p.m.