Files in sthomas522/hmclearn
Fit Statistical Models Using Hamiltonian Monte Carlo
.Rbuildignore
.github/.gitignore
.github/workflows/pkgdown.yaml
.gitignore
.travis.yml
DESCRIPTION
LICENSE.md
NAMESPACE
NEWS.md
R/.DS_Store
R/data.R
R/mcmc_diag.R
R/mcmc_functions.R
R/methods.R
R/plotfun.R
R/sample_posterior_gradients.R
R/utils.R
R/zzz_vignettes.R
README.md
_pkgdown.yml
cran-comments.md
data/Drugs.rda
data/Endometrial.rda
data/Gdat.RData
docs/404.html
docs/articles/index.html
docs/articles/linear_mixed_effects_hmclearn.html
docs/articles/linear_mixed_effects_hmclearn_files/figure-html/unnamed-chunk-6-1.png
docs/articles/linear_mixed_effects_hmclearn_files/figure-html/unnamed-chunk-8-1.png
docs/articles/linear_regression_hmclearn.html
docs/articles/linear_regression_hmclearn_files/figure-html/unnamed-chunk-8-1.png
docs/articles/linear_regression_hmclearn_files/figure-html/unnamed-chunk-9-1.png
docs/articles/logistic_mixed_effects_hmclearn.html
docs/articles/logistic_mixed_effects_hmclearn_files/figure-html/unnamed-chunk-12-1.png
docs/articles/logistic_mixed_effects_hmclearn_files/figure-html/unnamed-chunk-6-1.png
docs/articles/logistic_mixed_effects_hmclearn_files/figure-html/unnamed-chunk-9-1.png
docs/articles/logistic_regression_hmclearn.html
docs/articles/logistic_regression_hmclearn_files/figure-html/unnamed-chunk-7-1.png
docs/articles/logistic_regression_hmclearn_files/figure-html/unnamed-chunk-8-1.png
docs/articles/poisson_regression_hmclearn.html
docs/articles/poisson_regression_hmclearn_files/figure-html/unnamed-chunk-7-1.png
docs/articles/poisson_regression_hmclearn_files/figure-html/unnamed-chunk-8-1.png
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Drugs.html
docs/reference/Endometrial.html
docs/reference/Gdat.html
docs/reference/coef.hmclearn.html
docs/reference/diagplots-1.png
docs/reference/diagplots.hmclearn-1.png
docs/reference/diagplots.hmclearn.html
docs/reference/diagplots.html
docs/reference/hmc.fit.html
docs/reference/hmc.html
docs/reference/hmclearn-glm-posterior.html
docs/reference/hmclearn-plots-1.png
docs/reference/hmclearn-plots-2.png
docs/reference/hmclearn-plots-3.png
docs/reference/hmclearn-plots-4.png
docs/reference/hmclearn-plots-5.png
docs/reference/hmclearn-plots.html
docs/reference/index.html
docs/reference/leapfrog.html
docs/reference/mh.fit.html
docs/reference/mh.html
docs/reference/neff.hmclearn.html
docs/reference/neff.html
docs/reference/plot.hmclearn-1.png
docs/reference/plot.hmclearn.html
docs/reference/predict.hmclearn-1.png
docs/reference/predict.hmclearn.html
docs/reference/psrf.hmclearn.html
docs/reference/psrf.html
docs/reference/qfun.html
docs/reference/qprop-1.png
docs/reference/qprop.html
docs/reference/summary.hmclearn.html
hmclearn.Rproj
man/Drugs.Rd
man/Endometrial.Rd
man/Gdat.Rd
man/coef.hmclearn.Rd
man/diagplots.Rd
man/diagplots.hmclearn.Rd
man/hmc.Rd
man/hmc.fit.Rd
man/hmclearn-glm-posterior.Rd
man/hmclearn-plots.Rd
man/leapfrog.Rd
man/mh.Rd
man/mh.fit.Rd
man/neff.Rd
man/neff.hmclearn.Rd
man/plot.hmclearn.Rd
man/predict.hmclearn.Rd
man/psrf.Rd
man/psrf.hmclearn.Rd
man/qfun.Rd
man/qprop.Rd
man/summary.hmclearn.Rd
tests/testthat.R
tests/testthat/test_hmc.R
tests/testthat/test_mh.R
tests/testthat/test_paper.R
tests/testthat/test_util.R
tests/testthat/test_vignettes.R
vignettes/.gitignore
vignettes/fig1glmm-1.png
vignettes/fig1lmm-1.png
vignettes/fig1lr-1.png
vignettes/fig1poisson-1.png
vignettes/fig2glmm-1.png
vignettes/fig2lm-1.png
vignettes/fig2lmm-1.png
vignettes/fig2lr-1.png
vignettes/fig3glmm-1.png
vignettes/fig4glmm-1.png
vignettes/fig5glmm-1.png
vignettes/figlm-1.png
vignettes/fit2poisson-1.png
vignettes/linear_mixed_effects_hmclearn.Rmd
vignettes/linear_mixed_effects_hmclearn.Rmd.orig
vignettes/linear_regression_hmclearn.Rmd
vignettes/linear_regression_hmclearn.Rmd.orig
vignettes/lmmtrace-1.png
vignettes/logistic_mixed_effects_hmclearn.Rmd
vignettes/logistic_mixed_effects_hmclearn.Rmd.orig
vignettes/logistic_regression_hmclearn.Rmd
vignettes/logistic_regression_hmclearn.Rmd.orig
vignettes/poisson_regression_hmclearn.Rmd
vignettes/poisson_regression_hmclearn.Rmd.orig
