Files in stilianoudakis/preciseTAD
preciseTAD: A machine learning framework for precise TAD boundary prediction
.Rbuildignore
.github/.gitignore
.github/workflows/check-bioc.yml
.github/workflows/pkgdown.yaml
.gitignore
.travis.yml
CITATION.cff
DESCRIPTION
LICENSE
NAMESPACE
NEWS
R/TADrandomForest.R
R/TADrfe.R
R/arrowhead_gm12878_5kb.R
R/bedToGRangesList.R
R/binary_func.R
R/count_func.R
R/createTADdata.R
R/distance_func.R
R/extractBoundaries.R
R/juicer_func.R
R/percent_func.R
R/preciseTAD.R
R/signal_func.R
R/tfbsList.R
README.Rmd
README.md
_pkgdown.yml
data/arrowhead_gm12878_5kb.rda
data/tfbsList.rda
inst/extdata/Gm12878-Nfya-Sydh.bed
inst/extdata/Gm12878-Yy1-Sydh.bed
man/TADrandomForest.Rd
man/TADrfe.Rd
man/arrowhead_gm12878_5kb.Rd
man/bedToGRangesList.Rd
man/binary_func.Rd
man/count_func.Rd
man/createTADdata.Rd
man/distance_func.Rd
man/extractBoundaries.Rd
man/figures/README-pressure-1.png
man/juicer_func.Rd
man/percent_func.Rd
man/preciseTAD.Rd
man/signal_func.Rd
man/tfbsList.Rd
tests/testthat.R
tests/testthat/test_TADrandomForest.R
tests/testthat/test_TADrfe.R
tests/testthat/test_bedToGRangesList.R
tests/testthat/test_createTADdata.R
tests/testthat/test_extractBoundaries.R
tests/testthat/test_juicer_func.R
tests/testthat/test_preciseTAD.R
vignettes/.gitignore
vignettes/figures/fig1_vignette.png
vignettes/figures/fig2_vignette.png
vignettes/preciseTAD.Rmd
vignettes/references.bib
vignettes/references.bib.bak
