landscape.new.intparam: Create a set of integer parameters

In stranda/quantsel: Spatially explicit population genetic simulations with polygenic traits and selection

Create a set of integer parameters

Description

Create a set of integer parameters for a Rmetasim landscape.

Usage

  ## must be called AFTER landscape.new.empty()
  rland <- landscape.new.intparam(rland,h=2,s=1,cg=0,ce=0,totgen=500,maxland=10000)

Arguments

rland	skeletion of landscape object, required
h	habitats (default=1), the number of different subpopulations within the landscape
s	stages (default=1), the number of stages in the life cycle of the organism
cg	currentgen (default=0), the current generation the simulation has reached
ce	currentepoch (default=0), the current epoch the simulation has reached
totgen	totoalgens (default=1000), the total number of generations to simulate
maxland	maxlandsize(default=200000), the maxium number of individuals that can exist in the simulation

Examples

  ## Defaults
  exampleland <- landscape.new.empty()
  exampleland <- landscape.new.intparam(exampleland)
  exampleland$intparam

  ## 2 habitats, 3 stage lifecycle, 1000000 generations, maximum 1000000 individuals
  exampleland <- landscape.new.empty()
  exampleland <- landscape.new.intparam(exampleland,h=2,s=2,totgen=1000000,maxland=1000000)
  exampleland$intparam

  rm(exampleland)

stranda/quantsel documentation built on July 10, 2022, 2:28 p.m.