beta_diversity: Beta diversity
In surh/AMOR: Abundance Matrix Operations in R
View source: R/beta_diversity.r
beta_diversity R Documentation
Beta diversity
Description
Calculate beta diversity from abundance matrix
Usage
beta_diversity(X, method = "Bray-Curtis", sample_dim = 2)
Arguments
X
Matrix with of abundances
method
Distance method to be used. One of: "Bray-Curtis"
sample_dim
Dimension that contains samples, 1 for rows
and 2 for columns. The other dimension should contain the taxa
Value
A dist object
Author(s)
Sur Herrera Paredes
See Also
dist
Examples
mat <- matrix(1:10,ncol = 2)
beta_diversity(mat)
surh/AMOR documentation built on Feb. 21, 2023, 6:31 a.m.
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View source: R/beta_diversity.r
| beta_diversity | R Documentation |
Beta diversity
Description
Calculate beta diversity from abundance matrix
Usage
beta_diversity(X, method = "Bray-Curtis", sample_dim = 2)
Arguments
X |
Matrix with of abundances |
method |
Distance method to be used. One of: "Bray-Curtis" |
sample_dim |
Dimension that contains samples, 1 for rows and 2 for columns. The other dimension should contain the taxa |
Value
A dist object
Author(s)
Sur Herrera Paredes
See Also
dist
Examples
mat <- matrix(1:10,ncol = 2) beta_diversity(mat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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