LatentVariablePlots: Plot Estimated Latent Variables Against Covariates

In sustainablefarms/linking-data: OBSOLETE: Linking Data Project R Package

Description

Plot Estimated Latent Variables Against Covariates

Usage

plot_LVvscovar.fit(
  fit,
  esttype = "median",
  theta = NULL,
  covar,
  facetvars = NULL,
  cuts = 3,
  aggregatefcn = mean
)

plotdf_LVvscovar.fit(
  fit,
  esttype = "median",
  theta = NULL,
  covar,
  aggregatefcn = mean
)

Arguments

fit	A fitted runjags object.
esttype	When fit is non-NULL, then esttype is used to extract parameter values
theta	a vector of model parameters with BUGS names
covar	a dataframe of covariate values. It must have a column labelled 'ModelSite' that gives the ModelSite of covariate value.
aggregatefcn	Rows in covar with duplicate ModelSite values are aggregrated using this function

Functions

• plot_LVvscovar.fit: Plot estimated latent variable values against covariate values for occupancy

• plotdf_LVvscovar.fit: Prepare plotting data frames for latent variable values against covariate values for occupancy

sustainablefarms/linking-data documentation built on Oct. 28, 2020, 2:41 a.m.