volcano_plot: A Function to Generate Volcano Plots from edgeR Results
In svarsen/SVApack: A loose collection of functions that Sam uses for bioinformatics projects
Description
Usage
Arguments
Examples
Description
This function allows you to easily visualize your DEGs
Usage
1
volcano_plot(et, Title, thresh)
Arguments
et
edgeR output of edgeR glmQLFTest function
Title
String title of the volcano plot
thresh
threshold for statistical significance
Examples
1
volcano_plot(glmQLFTest(fit, contrast=my.contrasts[,"Contrast1"]),"Contrast 1", 0.01)
svarsen/SVApack documentation built on Nov. 5, 2019, 9:41 a.m.
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Description Usage Arguments Examples
Description
This function allows you to easily visualize your DEGs
Usage
1 | volcano_plot(et, Title, thresh)
|
Arguments
et |
edgeR output of edgeR glmQLFTest function |
Title |
String title of the volcano plot |
thresh |
threshold for statistical significance |
Examples
1 | volcano_plot(glmQLFTest(fit, contrast=my.contrasts[,"Contrast1"]),"Contrast 1", 0.01)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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