infer_csnem: Infer CSNEM
In sverchkov/csnem: Context-Specific Nested Effects Models, a network inference method for high-throughput knockout screens
Description
Usage
Arguments
Value
Description
Infer CSNEM
Usage
1
infer_csnem(log_likelihood_matrix, k)
Arguments
log_likelihood_matrix
A matrix where each row corresponds to an effect and each column corresponds to
an action, where each cell corresponds to the log likelihood ratio of the effect being differentially expressed
as a result of that action.
k
The number of contexts
Value
CSNEM (with equivalent nodes merged)
sverchkov/csnem documentation built on Nov. 5, 2019, 9:41 a.m.
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Description Usage Arguments Value
Description
Infer CSNEM
Usage
1 | infer_csnem(log_likelihood_matrix, k)
|
Arguments
log_likelihood_matrix |
A matrix where each row corresponds to an effect and each column corresponds to an action, where each cell corresponds to the log likelihood ratio of the effect being differentially expressed as a result of that action. |
k |
The number of contexts |
Value
CSNEM (with equivalent nodes merged)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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