simdata: Simulated data

In svetlanache/rapids: What the Package Does (One Line, Title Case)

Simulated data

Description

Simulated data for cross-validated adaptive signature design/cross-validated risk scores design.

Usage

data(simdata)

Format

A list of 3 data frames: patients, covar, response. The list corresponds to the output of the simulate.data function.

patients: A data frame with one row per patient and the following columns: FID (family ID), IID (individual ID), treat (1 for the treatment arm and 0 for the control arm), rr (probability of a binary response).

covar: Covariate data for L covariates, one row per patient.

response: A data frame of simulated binary responses, one column per simulation run.

The order of the patients in the data frames should match.

Examples

#"cvrs" method
data(simdata)
sig = 0.05
group.prop.sig = 0.2
seed = 123
plotrs = T
method = "cvrs"
eta = NULL
R = NULL
G = NULL 
simres.cvrs = analyse.simdata(simdata, sig, group.prop.sig, method, eta, R, G, seed, plotrs)

#"cvasd" method
data(simdata)
sig = 0.05
group.prop.sig = 0.2
seed = 123
method = "cvasd"
seed = 123
plotrs = F
eta = c(0.01,0.02,0.03)
R = c(2,2.5,1.2)
G = c(3,2,1) 
simres.cvasd = analyse.simdata(simdata, sig, group.prop.sig, method, eta, R, G, seed, plotrs)

svetlanache/rapids documentation built on Sept. 15, 2023, 7 a.m.