Files in svteichman/TreeVizPackage
Tree Visualization Package
.DS_Store
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
R/alignments_to_cat.R
R/check_missingness.R
R/check_support.R
R/compute_geodesic.R
R/compute_logmap.R
R/count_topologies.R
R/genes_missing_outgroup.R
R/geodesic_MDS.R
R/get_target_genes.R
R/globals.R
R/list_long_branch_tips.R
R/perform_MDS.R
R/perform_smacof.R
R/plot_MDS.R
R/plot_boot_support.R
R/plot_gene_support.R
R/plot_logmap.R
R/plot_node_value.R
R/plot_support.R
R/recode_long_branch.R
R/recode_outgroup.R
R/remove_empty_lines.R
R/remove_genomes.R
R/rename_labs.R
R/scale_MDS.R
TreeVizPackage.Rproj
inst/java/gtp.jar
inst/java/logmap.jar
man/alignments_to_cat.Rd
man/check_missingness.Rd
man/check_support.Rd
man/compute_geodesic.Rd
man/compute_logmap.Rd
man/count_topologies.Rd
man/genes_missing_outgroup.Rd
man/geodesic_MDS.Rd
man/get_target_genes.Rd
man/list_long_branch_tips.Rd
man/perform_MDS.Rd
man/perform_smacof.Rd
man/plot_MDS.Rd
man/plot_boot_support.Rd
man/plot_gene_support.Rd
man/plot_logmap.Rd
man/plot_node_value.Rd
man/plot_support.Rd
man/recode_long_branch.Rd
man/recode_outgroup.Rd
man/remove_empty_lines.Rd
man/remove_genomes.Rd
man/rename_labs.Rd
man/scale_MDS.Rd
