check_missingness: Check missingness Compute the proportion of missingness for...

View source: R/check_missingness.R

check_missingnessR Documentation

Check missingness Compute the proportion of missingness for each genome and gene combination.

Description

Check missingness Compute the proportion of missingness for each genome and gene combination.

Usage

check_missingness(gene_names, tip_names, path = "", tail = ".fa")

Arguments

gene_names

A list of names of genes.

tip_names

A list of names of genomes (tips of the phylogeny).

path

The path to the fasta file.

tail

The end of the path to the fasta file.

Value

A matrix with the proportion of missingness for each genome and gene combination.


svteichman/TreeVizPackage documentation built on June 22, 2022, 11:21 p.m.