Man pages for sw1/theseus
Analysis and Visualization Tools for Microbial Community Data
| cohort_relabund | Creates a relative abundance cohort plot |
| constord | Plots constrained ordination results |
| envtoverlay | Environmental variable fitting to unconstrained ordination... |
| prev | Create prevalence vs abundance plot |
| pstoveg_otu | converts the otu_table slot of a phyloseq object to a... |
| pstoveg_sample | Converts sample_data slot of a phyloseq object to... |
| pstoveg_sd | converts the sam_data slot of a phyloseq object to a... |
| qualcontour | Create read quality color contour plots |
| reexports | Objects exported from other packages |
| sigtab | Differential abundance data |
| sigtab.2vs3 | Differential abundance data |
| WWTP_Impact | Freshwater stream microbiome data |
