simulatorCpp: simulator C++

In sylvainschmitt/ecoevosimulator: Eco-evolutionnary simulator

Description

Eco-evolutionary simulator in C++.

Usage

simulatorCpp(
  Topo,
  NCI,
  grid = 10L,
  Nt = 50L,
  timestep = 30L,
  sigmaGtopo = 1,
  sigmaZtopo = 1,
  sigmaGnci = 2.651,
  sigmaZnci = 2.651,
  Pdeath = 0.01325548,
  Ns = 4L,
  Rpollination = 1L,
  Rdispersion = 1L,
  determinist = TRUE
)

Arguments

Topo	matrix. Topography matrix generated with 'sinusoidalTopogrpahy', 'squareDiamondTopography', 'paracouTopography'.
NCI	matrix. NCI matrix generated with 'generateNCI'.
grid	int. Number of cell per side of the matrix.
Nt	int. Number of time steps.
timestep	int. Time-step length in years.
sigmaGtopo	double. Variance of genetic values with topography.
sigmaZtopo	double. Plasticity of phenotypes with topography.
sigmaGnci	double. Variance of genetic values with NCI.
sigmaZnci	double. Plasticity of phenotypes with NCI.
Pdeath	double. Background mortality probability.
Ns	int. Number of seedlings per cell.
Rpollination	int. Pollination radius in cells (father to mother).
Rdispersion	int. Dispersal radius in cells (mother to seedling).
determinist	bool. Deterministic or probabilistic viability.

Value

List of 6 Topography, Atopo, Ztopo, NCI, Anci, Znci.

Examples

simulatorCpp(Topo = sinusoidalTopography(grid = 10, Elim = 5, amplitude = 0.01), 
             NCI = generateNCI(grid = 10, Nt = 50))

sylvainschmitt/ecoevosimulator documentation built on Nov. 19, 2020, 8:04 a.m.