Files in syma-research/CRT_microbiome

Conditional randomized test for microbiome data

R/MCMC.R R/copulasso.R R/gcoda.R R/glasso_wrapper.R R/helpers.R R/helpers_sim.R R/marginals.R R/nodewise.R R/sample_CR.R R/sample_gcoda.R R/viz.R rmds/CRT_proof.Rmd rmds/Hypotheses.Rmd rmds/MH_sampling.Rmd rmds/conditional_phat.Rmd rmds/copulasso_and_gcoda.Rmd rmds/dCRT_proof.Rmd rmds/gcoda_marginal.Rmd rmds/glasso_implementations.Rmd rmds/model_and_glasso.Rmd rmds/render_rmds.Rmd rmds/simple_CRT.Rmd tests/testthat.R tests/testthat/test-gcoda.R tests/testthat/test-gmm.R tests/testthat/test-helpers.R