cellProfileTruncate: Cell Profile Truncate

In ta-cameron/Cell-Profiles: Generate Cell Profile Demographs

Cell Profile Truncate

Description

cellProfileTruncate takes raw fluorescence intensity profiles from, eg, ImageJ, and truncates the specified number of rows from the beginning and end of each cell

Usage

cellProfileTruncate(data = NULL, adjust = 0)

Arguments

data	data frame, consisting of paired columns depicting (1) fluorescent intensity and (2) cell length. Accepts output directly from, eg, ImageJ
adjust	integer representing the number of data points to trim from each end of the profiles

Value

a data frame

See Also

cellProfiles

Examples

data_path <- system.file("extdata", "ftsZ_profiles.csv", package = "cellProfiles")
dtable <- read.table(data_path, header=FALSE, sep=",")
dtable_trimmed <- cellProfileTruncate(data=dtable, 1)

ta-cameron/Cell-Profiles documentation built on July 30, 2023, 8:50 a.m.