Files in tallulandrews/M3Drop
Michaelis-Menten Modelling of Dropouts in single-cell RNASeq
DESCRIPTION
NAMESPACE
R/Brennecke_implementation.R
R/Curve_fitting.R
R/DANB_Coexpression.R
R/DANB_HVG.R
R/Extremes.R
R/M3D_Imputation.R
R/NB_UMI.R
R/Normalization.R
R/Other_FS_functions.R
R/Plotting_fxns.R
R/Simulations_Functions.R
R/Threeway_ProportionalArea_VennDiagrams.R
R/Traditional_DE.R
R/basics.R
README
inst/NEWS
man/Brennecke_getVariableGenes.Rd
man/Consensus_FS.Rd
man/Fitting_Dropout_Models.Rd
man/Imputation.Rd
man/M3D_Clean_Data.Rd
man/M3D_ConverData.Rd
man/M3D_Differential_Expression.Rd
man/M3D_Dropout_Models.Rd
man/M3D_Expression_Heatmap.Rd
man/M3D_Get_Extremes.Rd
man/M3D_Get_Heatmap_Cell_Clusters.Rd
man/M3D_Plotting.Rd
man/M3D_Simulations.Rd
man/M3D_Test_Shift.Rd
man/M3D_ThreeSet_Venn.Rd
man/M3D_TraditionalDE.Rd
man/M3D_calc_var.Rd
man/M3D_getmarkers.Rd
man/M3D_horz_res.Rd
man/NBumi_CheckFit.Rd
man/NBumi_CoExpression.Rd
man/NBumi_CompareModels.Rd
man/NBumi_ConvertToInteger.Rd
man/NBumi_ConvrtData.Rd
man/NBumi_FSDrop.Rd
man/NBumi_FSHighVar.Rd
man/NBumi_FSOther.Rd
man/NBumi_FitDisp.Rd
man/NBumi_FitDispVsMean.Rd
man/NBumi_FitModel.Rd
man/NBumi_HVG.Rd
man/NBumi_PearsonResiduals.Rd
man/NBumi_TradDE.Rd
man/NewSimulations.Rd
man/Other_FS.Rd
man/PoissonUMIFeatureSelectionDropouts.Rd
man/bg__fit_gamma.Rd
man/bg__get_stats.Rd
man/bg__mean2disp.Rd
man/bg__shift_size.Rd
man/bg__var_vs_drop.Rd
vignettes/M3Drop_Vignette.Rnw
