Man pages for tanja819/TreePar
Estimating Birth and Death Rates Based on Phylogenies
| addroot | addroot: Adds a root edge ancestral to the first branching... |
| bd.age.optim.matlab | bd.age.optim.matlab: Estimating speciation rate and... |
| bd.densdep.optim | bd.densdep.optim: Estimating maximum likelihood speciation... |
| bd.shifts.optim | bd.shifts.optim: Estimating speciation and extinction rate... |
| bd.shifts.plot | bd.shifts.plot: Plots the diversification rate estimates... |
| bdsky.stt.optim | bdsky.stt.optim: Estimating piecewise constant birth and... |
| create.mat | create.mat: Generates input for LikAge and... |
| get.groups | get.groups: Generates input for bd.shifts.optim when... |
| LikAge | LikAge: Calculates the likelihood of speciation and... |
| LikConstant | LikConstant: Calculates the likelihood of constant birth and... |
| LikConstantn | LikConstantn: Calculates the likelihood of constant birth and... |
| LikDD | LikDD: Calculates the likelihood of speciation and extinction... |
| LikShifts | LikShifts: Calculates the likelihood of time-dependent birth... |
| LikShiftsPP | LikShiftsPP: Calculates the likelihood of time-dependent... |
| LikShiftsSTT | LikShiftsSTT: Calculates likelihood of piecewise constant... |
| LikTypesSTT | LikTypesSTT: Calculates the likelihood of the 2-type... |
| TreePar-package | Estimating Birth and Death Rates Based on Phylogenies |
