load_data_files: Loading data file

Description Usage Arguments Value

Description

Loading all data

Usage

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load_data_files(contig_lengths_file_path, input_file_path, common = TRUE,
  unique_1 = TRUE, unique_2 = TRUE, divergence_minor_allele = TRUE,
  divergence_major_allele = TRUE, chromosomes_names_file_path = NULL,
  plot.unplaced = TRUE)

Arguments

contig_lengths_file_path

Path to contig lengths file

input_file_path

Path to file generated by postpsass

common

Whether to load common category data (default: TURE)

unique_1

Whether to load unique_2 category data (default: TURE)

unique_2

Whether to load unique_2 category data (default: TURE)

divergence_minor_allele

Whether to load divergence_minor_allele category data (default: TURE)

divergence_major_allele

Whether to load divergence_major_allele category data (default: TURE)

chromosomes_names_file_path

Path to chromosomes names file

plot.unplaced

Whether to plot unplaced scaffolds

Value

Output all data in to a list


tankbuild/postpsassR documentation built on May 11, 2019, 3:07 p.m.