taotliu/mMPA: Implementation of Marker-Assisted Mini-Pooling with Algorithm
Version 0.1.0

To determine the number of quantitative assays needed for a sample of data using pooled testing methods, which include mini-pooling (MP), MP with algorithm (MPA), and marker-assisted MPA (mMPA). To estimate the number of assays needed, the package also provides a tool to conduct Monte Carlo (MC) to simulate different orders in which the sample would be collected to form pools. Using MC avoids the dependence of the estimated number of assays on any specific ordering of the samples to form pools.

Getting started

Package details

Author"Tao Liu <[email protected]> [aut, cre]" "Yizhen Xu <[email protected]> [aut]"
MaintainerTao Liu <[email protected]>
LicenseMIT + file LICENSE
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("taotliu/mMPA")
taotliu/mMPA documentation built on May 27, 2017, 2:16 a.m.