accessors: Accessor functions for individual slots of 'MS2spectrum' and...

In tdepke/CluMSID: Clustering of MS2 Spectra for Metabolite Identification

Accessor functions for individual slots of MS2spectrum and pseudospectrum objects

Description

Accessor functions for individual slots of MS2spectrum and pseudospectrum objects

Usage

accessID(x)

accessAnnotation(x)

accessPrecursor(x)

accessRT(x)

accessPolarity(x)

accessSpectrum(x)

accessNeutralLosses(x)

Arguments

x	An object of class MS2spectrum or pseudospectrum

Value

The value of the respective slot of the object (id, annotation, precursor, rt, spectrum, neutral_losses)

Examples

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessID(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessAnnotation(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessPrecursor(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessRT(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessPolarity(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessSpectrum(annotatedSpeclist[[1]])

load(file = system.file("extdata",
    "annotatedSpeclist.RData",
    package = "CluMSIDdata"))

accessNeutralLosses(annotatedSpeclist[[1]])

tdepke/CluMSID documentation built on April 10, 2022, noon