genotypes: Detecting genotype variants

genotypesR Documentation

Detecting genotype variants

Description

Reference and Alternate DNA sequences are given, and we want to extract exactly two of these from each genotype, or NA.

Usage

data(genotypes)

Format

A data frame with 625442 observations on the following 3 variables.

Ref

The reference sequence/allele on hg19

Alt

Comma-separated list of possible Alternate alleles.

genotype

Two alleles which are concatenated without any separator.


tdhock/revector documentation built on June 14, 2022, 12:22 a.m.