genotypes: Detecting genotype variants

Description Usage Format

Description

Reference and Alternate DNA sequences are given, and we want to extract exactly two of these from each genotype, or NA.

Usage

1

Format

A data frame with 625442 observations on the following 3 variables.

Ref

The reference sequence/allele on hg19

Alt

Comma-separated list of possible Alternate alleles.

genotype

Two alleles which are concatenated without any separator.


tdhock/revector documentation built on May 31, 2019, 7:38 a.m.