simdata: Example of Quantifications on Simulation Data
In tengmx/rnaseqcomp: Benchmarks for RNA-seq Quantification Pipelines

This dataset include quantifications on 15776 transcripts on two cell lines each with 8 replicates. The true differential expressed transcripts were simulated. Quantifications from two pipelines (RSEM and FluxCapacitor) are included in this dataset at simdata$quant. Meta information of transcripts is included at simdata$meta, inlcuding if they belongs to house keeping genes and their true fold change status. Sample information is included at simdata$samp.

A list of objects including list of two 15776*16 quantification matrices, one 15776*6 data frame with meta information and one 16*3 data frame with sample information.

tengmx/rnaseqcomp documentation built on March 12, 2020, 10:56 a.m.