API for tgac-vumc/ACE
Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
| Global functions | |
|---|---|
| ACE | Man page |
| ACE-package | Man page |
| ACEcall | Man page Source code |
| analyzegenomiclocations | Man page Source code |
| compresstemplate | Man page Source code |
| copyNumbersSegmented | Man page |
| correlationmatrix | Man page Source code |
| correlationmatrixadjusted | Man page Source code |
| forcesegmentsontemplate | Man page Source code |
| getadjustedsegments | Man page Source code |
| linkvariants | Man page Source code |
| loopsquaremodel | Man page Source code |
| multiplot | Source code |
| objectsampletotemplate | Man page Source code |
| ploidyplotloop | Man page Source code |
| postanalysisloop | Man page Source code |
| runACE | Man page Source code |
| segmentstotemplate | Man page Source code |
| singlemodel | Man page Source code |
| singleplot | Man page Source code |
| squaremodel | Man page Source code |
| squaremodelsummary | Man page Source code |
| templatefromequalsegments | Man page Source code |
| twosamplecompare | Man page Source code |
