Files in tgac-vumc/ACE
Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
DESCRIPTION
NAMESPACE
NEWS
R/ACE.R
R/accessory_functions.R
README.md
data/copyNumbersSegmented.rda
inst/CITATION
man/ACE-package.Rd
man/ACEcall.Rd
man/analyzegenomiclocations.Rd
man/compresstemplate.Rd
man/copyNumbersSegmented.Rd
man/correlationmatrix.Rd
man/forcesegmentsontemplate.Rd
man/getadjustedsegments.Rd
man/linkvariants.Rd
man/loopsquaremodel.Rd
man/objectsampletotemplate.Rd
man/postanalysisloop.Rd
man/runACE.Rd
man/segmentstotemplate.Rd
man/singlemodel.Rd
man/singleplot.Rd
man/squaremodel.Rd
man/squaremodelsummary.Rd
man/templatefromequalsegments.Rd
man/twosamplecompare.Rd
vignettes/ACE_vignette.Rmd
