get_gamma_rates: Discretized Gamma distribution
In thauffe/simDES: Simulate fossil biogeography
View source: R/get_gamma_rates.R
get_gamma_rates R Documentation
Discretized Gamma distribution
Description
This function discretizes the Gamma distribution and
is used to simulate heterogeneous fossil preservation via multiplication
with the preservation rate
Usage
get_gamma_rates(alpha, Ncat)
Arguments
alpha
i.e. the shape and rate of the Gamma distribution
Ncat
Number of categories for the discretized Gamma distribution
Value
Discretized Gamma distribution
Author(s)
Torsten Hauffe
References
Yang, Z. (1993).
Maximum-likelihood estimation of phylogeny from DNA sequences
when substitution rates differ over sites.
Molecular Biology and Evolution 10(6): 1396-1401.
thauffe/simDES documentation built on June 29, 2023, 7:05 a.m.
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View source: R/get_gamma_rates.R
| get_gamma_rates | R Documentation |
Discretized Gamma distribution
Description
This function discretizes the Gamma distribution and is used to simulate heterogeneous fossil preservation via multiplication with the preservation rate
Usage
get_gamma_rates(alpha, Ncat)
Arguments
alpha |
i.e. the shape and rate of the Gamma distribution |
Ncat |
Number of categories for the discretized Gamma distribution |
Value
Discretized Gamma distribution
Author(s)
Torsten Hauffe
References
Yang, Z. (1993). Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Molecular Biology and Evolution 10(6): 1396-1401.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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