Files in theMILOlab/SPATAImmune
What the Package Does (One Line, Title Case)

.DS_Store

.Rbuildignore

.gitignore

DESCRIPTION

NAMESPACE

Package.stuff.R

R/.DS_Store

R/Import.functions.R R/check.functions.R R/family.get.R R/family.hlp.R R/family.import.R R/family.plots.R R/family.run.R README.md ReadCorrection.R

SPATAImmune.Rproj

ST_SC_Reco.R VDJ_Plot_subtype.spatial_Module_consensus_1.pdf VDJ_Plot_subtype.spatial_Module_consensus_2.pdf VDJ_Plot_subtype.spatial_Module_consensus_3.pdf VDJ_Plot_subtype.spatial_Module_consensus_4.pdf VDJ_Plot_subtype.spatial_Module_consensus_5.pdf VectorField.R

internalRsequence.aln

internalRsequence.dnd

man/GetClonalityAnalysis.Rd man/GetColors.Rd man/GetSPTCR.Rd man/GetVDJ.Rd man/ImportSPTCRseq.Rd man/ImportVDJ.Rd man/addReArrangmentMatrix.Rd man/check.SPATA.Rd man/create.IAF.Rd man/getSpatialRegression.Rd man/hlpFlattenDF.Rd man/hlpList2Array.Rd man/import.sam.files.Rd man/modelAA2vec.Rd man/plot3DClonality2ST.Rd man/plotAAlogo.Rd man/plotAggregatedDimred.Rd man/plotBarCompare.Rd man/plotDonut.Rd man/plotQualityIgBlast.Rd man/plotRiver.Rd man/plotVDJArrangments.Rd man/plotVDJCirclize.Rd man/readsamfiles.Rd man/runClonalityAnalysis.Rd man/runKmers.Rd man/runSPTCRdeep.Rd man/runSpaceXR.Rd man/verbose.text.Rd

mmd_latentspace_epoch_0.png

theMILOlab/SPATAImmune documentation built on Nov. 22, 2022, 6:29 p.m.

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