runSPTCRdeep: runSPTCRdeep -Deprecated -

In theMILOlab/SPATAImmune: What the Package Does (One Line, Title Case)

runSPTCRdeep -Deprecated -

Description

This function import the VDJ data from the SPTCR-Pipline or IgBlast

Usage

runSPTCRdeep(
  object,
  constant = NULL,
  run.AA2vector = T,
  run.ANN = T,
  kmer.length = 3,
  embedding_size = 10,
  skip_window = 5,
  epochs.w2v = 80,
  LSTM = T,
  epochs.LSTM = 40,
  VAE = F,
  num_sampled = 1,
  epochs = 40,
  LSTMBatch = 1000,
  temp.save = T,
  temp.folder = getwd()
)

Value

SPATA object

Author(s)

Dieter Henrik Heiland

theMILOlab/SPATAImmune documentation built on Nov. 22, 2022, 6:29 p.m.