multi_beat: Run MultiBeat
In thekuhninator/beat: A Package for Assessing the Magnitute of the Batch Effect in RNA-Seq Data.
Description
Takes in gene counts, metadata, and output paths, as well as a dataset name and outputs an html report.
Usage
1
multi_beat(parent_dir, output_dir, output_name)
Arguments
parent_dir
the path to the parent directory that holds in it subdirectories or their subdirectories, files with the .beat extension (beat log files) These will then be used for the final report.
output_dir
the path where the final report and figures will be generated.
output_name
the name of the report.
thekuhninator/beat documentation built on Oct. 11, 2021, 10:54 a.m.
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Description
Takes in gene counts, metadata, and output paths, as well as a dataset name and outputs an html report.
Usage
1 | multi_beat(parent_dir, output_dir, output_name)
|
Arguments
parent_dir |
the path to the parent directory that holds in it subdirectories or their subdirectories, files with the .beat extension (beat log files) These will then be used for the final report. |
output_dir |
the path where the final report and figures will be generated. |
output_name |
the name of the report. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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