package: Full genome sequences for P. falciparum 3D7

In thephilross/bsgenome.pf.v24: Full genome sequences for P. falciparum 3D7

Description

Full genome sequence for P. falciparum 3D7 reference strain as provided by PlasmoDB in version 24

Note

This BSgenome data package was made from the following source data files:

-- information not available --
  

See ?BSgenomeForge and the BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Author(s)

Philipp Ross

See Also

• BSgenome objects and the available.genomes function in the BSgenome software package.

• DNAString objects in the Biostrings package.

• The BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Examples

BSgenome.Pfalciparum.PlasmoDB.v24
genome <- BSgenome.Pfalciparum.PlasmoDB.v24
head(seqlengths(genome))


## ---------------------------------------------------------------------
## Genome-wide motif searching
## ---------------------------------------------------------------------
## See the GenomeSearching vignette in the BSgenome software
## package for some examples of genome-wide motif searching using
## Biostrings and the BSgenome data packages:
if (interactive())
    vignette("GenomeSearching", package="BSgenome")

thephilross/bsgenome.pf.v24 documentation built on May 31, 2019, 9:49 a.m.