calc_fraction: Calculate the expected fraction of substitutions at the...
In thijsjanzen/nodeSub: Simulate DNA Alignments Using Node Substitutions
View source: R/calc_rel_contr_node_time.R
calc_fraction R Documentation
Calculate the expected fraction of substitutions at the nodes,
relative to the fraction at the branches
Description
calculates the relative contribution of substitutions at
the nodes
Usage
calc_fraction(phy = NULL, node_time = 0, model = "unlinked")
Arguments
phy
phylogenetic tree (optional)
node_time
time spent at the node
model
node substitution model
Value
expected fraction
thijsjanzen/nodeSub documentation built on Nov. 15, 2023, 2:44 p.m.
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View source: R/calc_rel_contr_node_time.R
| calc_fraction | R Documentation |
Calculate the expected fraction of substitutions at the nodes, relative to the fraction at the branches
Description
calculates the relative contribution of substitutions at the nodes
Usage
calc_fraction(phy = NULL, node_time = 0, model = "unlinked")
Arguments
phy |
phylogenetic tree (optional) |
node_time |
time spent at the node |
model |
node substitution model |
Value
expected fraction
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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