getSig: Calculate significance statistics

In thom82/whassocr: An Implementation of Whitehead's Association Analysis

Description

Calculate significance statistics based on a list returned by randomGraphs

Usage

getSig(x, rgraphs)

Arguments

x	a n x n association matrix returned by makeAssociation
rgraphs	a list object returned by randomGraphs

Value

A list of significance statistics:

pl	A n x n matrix containing the percentage for each cell of random association graphs that have values below the value in x. This is essentially a p-value for whether x_ij is lower than expected
pu	A n x n matrix containing the percentage for each cell of random association graphs that have values above the value in x. This is essentially a p-value for whether x_ij is higher than expected
S	The mean square deviation of the association matrix x
Sp	The percentage of random association matrices with mean square deviations greater than S. This is essentially a p-value for whether the mean square deviation of S is significantly larger than random, and thus that associations overall are occuring significantly more often than random.

thom82/whassocr documentation built on May 31, 2019, 10:46 a.m.