Man pages for thomazbastiaanssen/Volatility
Microbiome-oriented tool to compute degree of compositional change over time
| clr_imputed | Resample random values, perform CLR over each iteration and... |
| clr_lite | Impute zeroes and perform a centered log-ratio (CLR)... |
| get_fw_diff | Make a table of pairwise feature differences based on group... |
| get_fw_volatility | Make a table of pairwise feature differences based on group... |
| get_pairwise_distance | Make a table of pairwise distances based on group membership. |
| impute_zeroes | Replace zeroes with non-zero values in order to perform a... |
| vola_genus_table | The untransformed genus-level count table for the volatility... |
| vola_metadata | A snippet of the metadata from the volatility study |
| volatility | Compute volatility between pairs of microbiome count data |
| volatility_compute_clr | compute CLR using Aitchison's method |
