data/readme.md
In tianshilu/Netie: Neoantigen-T cell Interaction Estimation
- input_data.rda: a testing input for netie.
- simulation_input1.RData: the netie input for simulation dataset 1.
- simulation_output1.RData: the netie output for simulation dataset 1.
- simulation_input2.RData: the netie input for simulation dataset 2.
- simulation_output2.RData: the netie output for simulation dataset 2.
- simulation_input3.RData: the netie input for simulation dataset 3.
- simulation_output3.RData: the netie output for simulation dataset 3.
- tcga_pyclone.tar.gz: the pyclone output for TCGA cohorts.
- response_pyclone.tar.gz: the pyclone output for treatment cohorts.
- TCGA_netie_output/: the netie output for TCGA cohorts.
- response_netie_output/: the netie output for treatment cohorts.
The predicted neoantigens for patients are not provided due to the individual identifiable HLA information cannot be shared publicly according to HIPPA privacy rule.
tianshilu/Netie documentation built on Jan. 21, 2022, 6:24 p.m.
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- input_data.rda: a testing input for netie.
- simulation_input1.RData: the netie input for simulation dataset 1.
- simulation_output1.RData: the netie output for simulation dataset 1.
- simulation_input2.RData: the netie input for simulation dataset 2.
- simulation_output2.RData: the netie output for simulation dataset 2.
- simulation_input3.RData: the netie input for simulation dataset 3.
- simulation_output3.RData: the netie output for simulation dataset 3.
- tcga_pyclone.tar.gz: the pyclone output for TCGA cohorts.
- response_pyclone.tar.gz: the pyclone output for treatment cohorts.
- TCGA_netie_output/: the netie output for TCGA cohorts.
- response_netie_output/: the netie output for treatment cohorts.
The predicted neoantigens for patients are not provided due to the individual identifiable HLA information cannot be shared publicly according to HIPPA privacy rule.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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