hmdbCompMZ.metapone: the m/z values of common adduct ions of metapone metaboites
In tianwei-yu/metapone: Conducts pathway test of metabolomics data using a weighted permutation test
hmdbCompMZ.metapone R Documentation
the m/z values of common adduct ions of metapone metaboites
Description
Monoisotopic mass of common adduct ions, limited to those included in the pathways in metapone.
Usage
data("hmdbCompMZ.metapone")
Format
A data frame with 79350 observations on the following 3 variables.
HMDB_IDHMDB ID.
ion.typeAdduct ion type.
m.zthe m/z of the adduct ion.
Details
The main difference of using this dataset vs using hmdbCompMZ, is the metabolite universe in testing is limited to those metabolites matched to metapone pathways, not all HMDB metabolites.
Source
References
Examples
data(hmdbCompMZ)
tianwei-yu/metapone documentation built on Aug. 21, 2022, 3:09 a.m.
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| hmdbCompMZ.metapone | R Documentation |
the m/z values of common adduct ions of metapone metaboites
Description
Monoisotopic mass of common adduct ions, limited to those included in the pathways in metapone.
Usage
data("hmdbCompMZ.metapone")
Format
A data frame with 79350 observations on the following 3 variables.
HMDB_IDHMDB ID.
ion.typeAdduct ion type.
m.zthe m/z of the adduct ion.
Details
The main difference of using this dataset vs using hmdbCompMZ, is the metabolite universe in testing is limited to those metabolites matched to metapone pathways, not all HMDB metabolites.
Source
References
Examples
data(hmdbCompMZ)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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