request_wikipathway: Retrieve Detailed Pathway Data from WikiPathways

In tidymass/massdatabase: Play with databases about mass spectrometry

Retrieve Detailed Pathway Data from WikiPathways

Description

This function fetches detailed information about a specific pathway from WikiPathways using its pathway ID.

Usage

request_wikipathway(pathway_id = "WP5293")

Arguments

pathway_id

A character string specifying the WikiPathways ID (e.g., "WP5293").

Value

A list containing:

• pathway_info - Metadata about the pathway.

• pathway_description - A description of the pathway.

• node_info - A data frame containing gene/metabolite nodes.

• edge_info - A data frame containing interaction edges.

Examples

data = request_wikipathway("WP5293")
data$pathway_info

tidymass/massdatabase documentation built on March 29, 2025, 10:51 p.m.