revdep/failures.md
In tidyverse/magrittr: A Forward-Pipe Operator for R
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
CB2
- Version: 1.3.4
- Source code: https://github.com/cran/CB2
- Date/Publication: 2020-07-24 09:42:24 UTC
- Number of recursive dependencies: 105
Run cloud_details(, "CB2") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/CB2/new/CB2.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘CB2/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CB2’ version ‘1.3.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/CB2/old/CB2.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘CB2/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CB2’ version ‘1.3.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
cbar
- Version: 0.1.3
- Source code: https://github.com/cran/cbar
- URL: https://github.com/zedoul/cbar
- BugReports: https://github.com/zedoul/cbar/issues
- Date/Publication: 2017-10-24 13:20:22 UTC
- Number of recursive dependencies: 66
Run cloud_details(, "cbar") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/cbar/new/cbar.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘cbar/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cbar’ version ‘0.1.3’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'Boom', 'bsts'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/cbar/old/cbar.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘cbar/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cbar’ version ‘0.1.3’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'Boom', 'bsts'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
diceR
- Version: 1.0.0
- Source code: https://github.com/cran/diceR
- URL: https://github.com/AlineTalhouk/diceR, https://alinetalhouk.github.io/diceR
- BugReports: https://github.com/AlineTalhouk/diceR/issues
- Date/Publication: 2020-07-07 22:30:02 UTC
- Number of recursive dependencies: 143
Run cloud_details(, "diceR") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/diceR/new/diceR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘diceR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘diceR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘NMF’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/diceR/old/diceR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘diceR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘diceR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘NMF’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
dimRed
- Version: 0.2.3
- Source code: https://github.com/cran/dimRed
- URL: https://github.com/gdkrmr/dimRed
- Date/Publication: 2019-05-08 08:10:07 UTC
- Number of recursive dependencies: 139
Run cloud_details(, "dimRed") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/dimRed/new/dimRed.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘dimRed/DESCRIPTION’ ... OK
* this is package ‘dimRed’ version ‘0.2.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘NMF’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/dimRed/old/dimRed.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘dimRed/DESCRIPTION’ ... OK
* this is package ‘dimRed’ version ‘0.2.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘NMF’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
ESTER
- Version: 0.2.0
- Source code: https://github.com/cran/ESTER
- URL: https://github.com/lnalborczyk/ESTER
- BugReports: https://github.com/lnalborczyk/ESTER/issues
- Date/Publication: 2017-12-10 14:21:14 UTC
- Number of recursive dependencies: 164
Run cloud_details(, "ESTER") for more info
In both
- checking whether package ‘ESTER’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/ESTER/new/ESTER.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘ESTER’ ...
** package ‘ESTER’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: namespace ‘rstan’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘rstan’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘ESTER’
* removing ‘/tmp/workdir/ESTER/new/ESTER.Rcheck/ESTER’
CRAN
* installing *source* package ‘ESTER’ ...
** package ‘ESTER’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: namespace ‘rstan’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘rstan’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘ESTER’
* removing ‘/tmp/workdir/ESTER/old/ESTER.Rcheck/ESTER’
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
ggmsa
- Version: 0.0.4
- Source code: https://github.com/cran/ggmsa
- Date/Publication: 2020-05-28 10:50:10 UTC
- Number of recursive dependencies: 81
Run cloud_details(, "ggmsa") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/ggmsa/new/ggmsa.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘ggmsa/DESCRIPTION’ ... OK
* this is package ‘ggmsa’ version ‘0.0.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘Biostrings’
Packages suggested but not available: 'ggtree', 'seqmagick'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/ggmsa/old/ggmsa.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘ggmsa/DESCRIPTION’ ... OK
* this is package ‘ggmsa’ version ‘0.0.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘Biostrings’
Packages suggested but not available: 'ggtree', 'seqmagick'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
jstor
- Version: 0.3.9
- Source code: https://github.com/cran/jstor
- URL: https://github.com/ropensci/jstor, https://docs.ropensci.org/jstor
- BugReports: https://github.com/ropensci/jstor/issues
- Date/Publication: 2020-06-04 04:50:03 UTC
- Number of recursive dependencies: 73
Run cloud_details(, "jstor") for more info
Error before installation
Devel
CRAN
* using log directory ‘/tmp/workdir/jstor/old/jstor.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘jstor/DESCRIPTION’ ... OK
* this is package ‘jstor’ version ‘0.3.9’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘jstor’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
mapdeck
- Version: 0.3.4
- Source code: https://github.com/cran/mapdeck
- URL: https://symbolixau.github.io/mapdeck/articles/mapdeck.html
- BugReports: https://github.com/SymbolixAU/mapdeck/issues
- Date/Publication: 2020-09-04 05:22:10 UTC
- Number of recursive dependencies: 83
Run cloud_details(, "mapdeck") for more info
In both
- checking whether package ‘mapdeck’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/mapdeck/new/mapdeck.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘mapdeck’ ...
** package ‘mapdeck’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aggregate.cpp -o aggregate.o
/tmp/ccZjU7ZO.s: Assembler messages:
/tmp/ccZjU7ZO.s: Fatal error: can't close aggregate.o: No space left on device
make: *** [/usr/lib/R/etc/Makeconf:177: aggregate.o] Error 1
ERROR: compilation failed for package ‘mapdeck’
* removing ‘/tmp/workdir/mapdeck/new/mapdeck.Rcheck/mapdeck’
CRAN
* installing *source* package ‘mapdeck’ ...
** package ‘mapdeck’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aggregate.cpp -o aggregate.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c geojson.cpp -o geojson.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mesh.cpp -o mesh.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c od.cpp -o od.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c path.cpp -o path.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c point.cpp -o point.o
/tmp/ccJov3g3.s: Assembler messages:
/tmp/ccJov3g3.s: Fatal error: can't close point.o: No space left on device
make: *** [/usr/lib/R/etc/Makeconf:177: point.o] Error 1
ERROR: compilation failed for package ‘mapdeck’
* removing ‘/tmp/workdir/mapdeck/old/mapdeck.Rcheck/mapdeck’
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
osmplotr
- Version: 0.3.2
- Source code: https://github.com/cran/osmplotr
- URL: https://github.com/ropensci/osmplotr
- BugReports: https://github.com/ropensci/osmplotr/issues
- Date/Publication: 2018-12-19 13:40:03 UTC
- Number of recursive dependencies: 119
Run cloud_details(, "osmplotr") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/osmplotr/new/osmplotr.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘osmplotr/DESCRIPTION’ ... OK
* this is package ‘osmplotr’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘ggm’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/osmplotr/old/osmplotr.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘osmplotr/DESCRIPTION’ ... OK
* this is package ‘osmplotr’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘ggm’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
precautionary
- Version: 0.1-5
- Source code: https://github.com/cran/precautionary
- URL: https://precisionmethods.guru/
- Date/Publication: 2020-11-03 06:30:02 UTC
- Number of recursive dependencies: 125
Run cloud_details(, "precautionary") for more info
In both
- checking whether package ‘precautionary’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/precautionary/new/precautionary.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘precautionary’ ...
** package ‘precautionary’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** exec
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘escalation’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘trialr’
Error: package ‘escalation’ could not be loaded
Execution halted
ERROR: lazy loading failed for package ‘precautionary’
* removing ‘/tmp/workdir/precautionary/new/precautionary.Rcheck/precautionary’
CRAN
* installing *source* package ‘precautionary’ ...
** package ‘precautionary’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** exec
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘escalation’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘trialr’
Error: package ‘escalation’ could not be loaded
Execution halted
ERROR: lazy loading failed for package ‘precautionary’
* removing ‘/tmp/workdir/precautionary/old/precautionary.Rcheck/precautionary’
psychonetrics
- Version: 0.8
- Source code: https://github.com/cran/psychonetrics
- URL: http://psychonetrics.org/
- BugReports: https://github.com/SachaEpskamp/psychonetrics/issues
- Date/Publication: 2020-10-26 21:50:03 UTC
- Number of recursive dependencies: 159
Run cloud_details(, "psychonetrics") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/psychonetrics/new/psychonetrics.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘psychonetrics’ version ‘0.8’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘metaSEM’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/psychonetrics/old/psychonetrics.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘psychonetrics’ version ‘0.8’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘metaSEM’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
RichR
- Version: 1.0.0
- Source code: https://github.com/cran/RichR
- Date/Publication: 2019-02-22 14:00:03 UTC
- Number of recursive dependencies: 39
Run cloud_details(, "RichR") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/RichR/new/RichR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘RichR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RichR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/RichR/old/RichR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘RichR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RichR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
ripe
- Version: 0.1.0
- Source code: https://github.com/cran/ripe
- URL: https://github.com/yonicd/ripe
- BugReports: https://github.com/yonicd/ripe/issues
- Date/Publication: 2019-12-06 10:10:02 UTC
- Number of recursive dependencies: 58
Run cloud_details(, "ripe") for more info
Newly broken
- checking whether package ‘ripe’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/ripe/new/ripe.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘ripe’ ...
** package ‘ripe’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in get("is_pipe", asNamespace("magrittr")) :
object 'is_pipe' not found
Error: unable to load R code in package ‘ripe’
Execution halted
ERROR: lazy loading failed for package ‘ripe’
* removing ‘/tmp/workdir/ripe/new/ripe.Rcheck/ripe’
CRAN
* installing *source* package ‘ripe’ ...
** package ‘ripe’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ripe)
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
smartdata
- Version: 1.0.3
- Source code: https://github.com/cran/smartdata
- URL: http://github.com/ncordon/smartdata
- BugReports: http://github.com/ncordon/smartdata/issues
- Date/Publication: 2019-12-18 17:40:02 UTC
- Number of recursive dependencies: 271
Run cloud_details(, "smartdata") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/smartdata/new/smartdata.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘smartdata/DESCRIPTION’ ... OK
* this is package ‘smartdata’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘adaptiveGPCA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/smartdata/old/smartdata.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘smartdata/DESCRIPTION’ ... OK
* this is package ‘smartdata’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘adaptiveGPCA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
SMITIDvisu
- Version: 0.0.8
- Source code: https://github.com/cran/SMITIDvisu
- URL: https://informatique-mia.inrae.fr/biosp/anr-smitid-project/, https://gitlab.paca.inrae.fr/SMITID/visu/
- Date/Publication: 2020-11-05 11:10:02 UTC
- Number of recursive dependencies: 84
Run cloud_details(, "SMITIDvisu") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/SMITIDvisu/new/SMITIDvisu.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘SMITIDvisu/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SMITIDvisu’ version ‘0.0.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘SMITIDstruct’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/SMITIDvisu/old/SMITIDvisu.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘SMITIDvisu/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SMITIDvisu’ version ‘0.0.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘SMITIDstruct’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
spectralAnalysis
- Version: 3.12.0
- Source code: https://github.com/cran/spectralAnalysis
- URL: http://www.openanalytics.eu
- Date/Publication: 2018-06-12 14:30:39 UTC
- Number of recursive dependencies: 117
Run cloud_details(, "spectralAnalysis") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/spectralAnalysis/new/spectralAnalysis.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘spectralAnalysis/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘spectralAnalysis’ version ‘3.12.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'BiocGenerics', 'NMF'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/spectralAnalysis/old/spectralAnalysis.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘spectralAnalysis/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘spectralAnalysis’ version ‘3.12.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'BiocGenerics', 'NMF'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
torch
- Version: 0.1.1
- Source code: https://github.com/cran/torch
- URL: https://torch.mlverse.org/docs, https://github.com/mlverse/torch
- BugReports: https://github.com/mlverse/torch/issues
- Date/Publication: 2020-10-20 21:10:02 UTC
- Number of recursive dependencies: 58
Run cloud_details(, "torch") for more info
Newly broken
- checking whether package ‘torch’ can be installed ... ERROR
Installation failed.
See ‘/tmp/workdir/torch/new/torch.Rcheck/00install.out’ for details.
Newly fixed
- checking installed package size ... NOTE
installed size is 157.6Mb
sub-directories of 1Mb or more:
R 3.1Mb
help 2.8Mb
libs 151.2Mb
Installation
Devel
* installing *source* package ‘torch’ ...
** package ‘torch’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c autograd.cpp -o autograd.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c contrib.cpp -o contrib.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cuda.cpp -o cuda.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c device.cpp -o device.o
In file included from device.cpp:2:
torch_types.h:7: warning: "LANTERN_HOST_HANDLER" redefined
7 | #define LANTERN_HOST_HANDLER lantern_host_handler();
|
In file included from device.cpp:1:
lantern/lantern.h:35: note: this is the location of the previous definition
35 | #define LANTERN_HOST_HANDLER
|
In file included from device.cpp:1:
lantern/lantern.h: In function ‘bool lanternInit(const string&, std::string*)’:
lantern/lantern.h:4097:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without
4097 | bool lanternInit(const std::string &libPath, std::string *pError)
| ^~~~~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dimname_list.cpp -o dimname_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dtype.cpp -o dtype.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gen-namespace.cpp -o gen-namespace.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c generator.cpp -o generator.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c indexing.cpp -o indexing.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lantern.cpp -o lantern.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c layout.cpp -o layout.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memory_format.cpp -o memory_format.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nn_utils_rnn.cpp -o nn_utils_rnn.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qscheme.cpp -o qscheme.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c quantization.cpp -o quantization.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reduction.cpp -o reduction.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c save.cpp -o save.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c storage.cpp -o storage.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor.cpp -o tensor.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_list.cpp -o tensor_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_options.cpp -o tensor_options.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c variable_list.cpp -o variable_list.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o torch.so RcppExports.o autograd.o contrib.o cuda.o device.o dimname_list.o dtype.o gen-namespace.o generator.o indexing.o lantern.o layout.o memory_format.o nn_utils_rnn.o qscheme.o quantization.o reduction.o save.o scalar.o storage.o tensor.o tensor_list.o tensor_options.o utils.o variable_list.o -L/usr/lib/R/lib -lR
Renaming torch lib to torchpkg
"/usr/lib/R/bin/Rscript" "../tools/renamelib.R"
installing to /tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/libs
** R
Warning in dir.create(outCodeDir) :
cannot create dir '/tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/R', reason 'No space left on device'
Error in .install_package_code_files(".", instdir) :
cannot open directory '/tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/R'
ERROR: unable to collate and parse R files for package ‘torch’
* removing ‘/tmp/workdir/torch/new/torch.Rcheck/torch’
CRAN
* installing *source* package ‘torch’ ...
** package ‘torch’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c autograd.cpp -o autograd.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c contrib.cpp -o contrib.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cuda.cpp -o cuda.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c device.cpp -o device.o
In file included from device.cpp:2:
torch_types.h:7: warning: "LANTERN_HOST_HANDLER" redefined
7 | #define LANTERN_HOST_HANDLER lantern_host_handler();
|
In file included from device.cpp:1:
lantern/lantern.h:35: note: this is the location of the previous definition
35 | #define LANTERN_HOST_HANDLER
|
In file included from device.cpp:1:
lantern/lantern.h: In function ‘bool lanternInit(const string&, std::string*)’:
lantern/lantern.h:4097:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without
4097 | bool lanternInit(const std::string &libPath, std::string *pError)
| ^~~~~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dimname_list.cpp -o dimname_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dtype.cpp -o dtype.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gen-namespace.cpp -o gen-namespace.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c generator.cpp -o generator.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c indexing.cpp -o indexing.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lantern.cpp -o lantern.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c layout.cpp -o layout.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memory_format.cpp -o memory_format.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nn_utils_rnn.cpp -o nn_utils_rnn.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qscheme.cpp -o qscheme.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c quantization.cpp -o quantization.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reduction.cpp -o reduction.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c save.cpp -o save.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c storage.cpp -o storage.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor.cpp -o tensor.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_list.cpp -o tensor_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_options.cpp -o tensor_options.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c variable_list.cpp -o variable_list.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o torch.so RcppExports.o autograd.o contrib.o cuda.o device.o dimname_list.o dtype.o gen-namespace.o generator.o indexing.o lantern.o layout.o memory_format.o nn_utils_rnn.o qscheme.o quantization.o reduction.o save.o scalar.o storage.o tensor.o tensor_list.o tensor_options.o utils.o variable_list.o -L/usr/lib/R/lib -lR
Renaming torch lib to torchpkg
"/usr/lib/R/bin/Rscript" "../tools/renamelib.R"
installing to /tmp/workdir/torch/old/torch.Rcheck/00LOCK-torch/00new/torch/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (torch)
tidyverse/magrittr documentation built on March 9, 2023, 2 p.m.
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NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
CB2
- Version: 1.3.4
- Source code: https://github.com/cran/CB2
- Date/Publication: 2020-07-24 09:42:24 UTC
- Number of recursive dependencies: 105
Run cloud_details(, "CB2") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/CB2/new/CB2.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘CB2/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CB2’ version ‘1.3.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/CB2/old/CB2.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘CB2/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘CB2’ version ‘1.3.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
cbar
- Version: 0.1.3
- Source code: https://github.com/cran/cbar
- URL: https://github.com/zedoul/cbar
- BugReports: https://github.com/zedoul/cbar/issues
- Date/Publication: 2017-10-24 13:20:22 UTC
- Number of recursive dependencies: 66
Run cloud_details(, "cbar") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/cbar/new/cbar.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘cbar/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cbar’ version ‘0.1.3’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'Boom', 'bsts'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/cbar/old/cbar.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘cbar/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘cbar’ version ‘0.1.3’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'Boom', 'bsts'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
diceR
- Version: 1.0.0
- Source code: https://github.com/cran/diceR
- URL: https://github.com/AlineTalhouk/diceR, https://alinetalhouk.github.io/diceR
- BugReports: https://github.com/AlineTalhouk/diceR/issues
- Date/Publication: 2020-07-07 22:30:02 UTC
- Number of recursive dependencies: 143
Run cloud_details(, "diceR") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/diceR/new/diceR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘diceR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘diceR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘NMF’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/diceR/old/diceR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘diceR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘diceR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘NMF’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
dimRed
- Version: 0.2.3
- Source code: https://github.com/cran/dimRed
- URL: https://github.com/gdkrmr/dimRed
- Date/Publication: 2019-05-08 08:10:07 UTC
- Number of recursive dependencies: 139
Run cloud_details(, "dimRed") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/dimRed/new/dimRed.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘dimRed/DESCRIPTION’ ... OK
* this is package ‘dimRed’ version ‘0.2.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘NMF’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/dimRed/old/dimRed.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘dimRed/DESCRIPTION’ ... OK
* this is package ‘dimRed’ version ‘0.2.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘NMF’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
ESTER
- Version: 0.2.0
- Source code: https://github.com/cran/ESTER
- URL: https://github.com/lnalborczyk/ESTER
- BugReports: https://github.com/lnalborczyk/ESTER/issues
- Date/Publication: 2017-12-10 14:21:14 UTC
- Number of recursive dependencies: 164
Run cloud_details(, "ESTER") for more info
In both
- checking whether package ‘ESTER’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/ESTER/new/ESTER.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘ESTER’ ...
** package ‘ESTER’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: namespace ‘rstan’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘rstan’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘ESTER’
* removing ‘/tmp/workdir/ESTER/new/ESTER.Rcheck/ESTER’
CRAN
* installing *source* package ‘ESTER’ ...
** package ‘ESTER’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: namespace ‘rstan’ is not available and has been replaced
by .GlobalEnv when processing object ‘’
Error in loadNamespace(j <- imp[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]) :
there is no package called ‘rstan’
Calls: <Anonymous> ... loadNamespace -> withRestarts -> withOneRestart -> doWithOneRestart
Execution halted
ERROR: lazy loading failed for package ‘ESTER’
* removing ‘/tmp/workdir/ESTER/old/ESTER.Rcheck/ESTER’
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
ggmsa
- Version: 0.0.4
- Source code: https://github.com/cran/ggmsa
- Date/Publication: 2020-05-28 10:50:10 UTC
- Number of recursive dependencies: 81
Run cloud_details(, "ggmsa") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/ggmsa/new/ggmsa.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘ggmsa/DESCRIPTION’ ... OK
* this is package ‘ggmsa’ version ‘0.0.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘Biostrings’
Packages suggested but not available: 'ggtree', 'seqmagick'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/ggmsa/old/ggmsa.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘ggmsa/DESCRIPTION’ ... OK
* this is package ‘ggmsa’ version ‘0.0.4’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘Biostrings’
Packages suggested but not available: 'ggtree', 'seqmagick'
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
jstor
- Version: 0.3.9
- Source code: https://github.com/cran/jstor
- URL: https://github.com/ropensci/jstor, https://docs.ropensci.org/jstor
- BugReports: https://github.com/ropensci/jstor/issues
- Date/Publication: 2020-06-04 04:50:03 UTC
- Number of recursive dependencies: 73
Run cloud_details(, "jstor") for more info
Error before installation
Devel
CRAN
* using log directory ‘/tmp/workdir/jstor/old/jstor.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘jstor/DESCRIPTION’ ... OK
* this is package ‘jstor’ version ‘0.3.9’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘jstor’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking R/sysdata.rda ... OK
* checking installed files from ‘inst/doc’ ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
mapdeck
- Version: 0.3.4
- Source code: https://github.com/cran/mapdeck
- URL: https://symbolixau.github.io/mapdeck/articles/mapdeck.html
- BugReports: https://github.com/SymbolixAU/mapdeck/issues
- Date/Publication: 2020-09-04 05:22:10 UTC
- Number of recursive dependencies: 83
Run cloud_details(, "mapdeck") for more info
In both
- checking whether package ‘mapdeck’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/mapdeck/new/mapdeck.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘mapdeck’ ...
** package ‘mapdeck’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aggregate.cpp -o aggregate.o
/tmp/ccZjU7ZO.s: Assembler messages:
/tmp/ccZjU7ZO.s: Fatal error: can't close aggregate.o: No space left on device
make: *** [/usr/lib/R/etc/Makeconf:177: aggregate.o] Error 1
ERROR: compilation failed for package ‘mapdeck’
* removing ‘/tmp/workdir/mapdeck/new/mapdeck.Rcheck/mapdeck’
CRAN
* installing *source* package ‘mapdeck’ ...
** package ‘mapdeck’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aggregate.cpp -o aggregate.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c geojson.cpp -o geojson.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c mesh.cpp -o mesh.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c od.cpp -o od.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c path.cpp -o path.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c point.cpp -o point.o
/tmp/ccJov3g3.s: Assembler messages:
/tmp/ccJov3g3.s: Fatal error: can't close point.o: No space left on device
make: *** [/usr/lib/R/etc/Makeconf:177: point.o] Error 1
ERROR: compilation failed for package ‘mapdeck’
* removing ‘/tmp/workdir/mapdeck/old/mapdeck.Rcheck/mapdeck’
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
osmplotr
- Version: 0.3.2
- Source code: https://github.com/cran/osmplotr
- URL: https://github.com/ropensci/osmplotr
- BugReports: https://github.com/ropensci/osmplotr/issues
- Date/Publication: 2018-12-19 13:40:03 UTC
- Number of recursive dependencies: 119
Run cloud_details(, "osmplotr") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/osmplotr/new/osmplotr.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘osmplotr/DESCRIPTION’ ... OK
* this is package ‘osmplotr’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘ggm’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/osmplotr/old/osmplotr.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘osmplotr/DESCRIPTION’ ... OK
* this is package ‘osmplotr’ version ‘0.3.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘ggm’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
precautionary
- Version: 0.1-5
- Source code: https://github.com/cran/precautionary
- URL: https://precisionmethods.guru/
- Date/Publication: 2020-11-03 06:30:02 UTC
- Number of recursive dependencies: 125
Run cloud_details(, "precautionary") for more info
In both
- checking whether package ‘precautionary’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/precautionary/new/precautionary.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘precautionary’ ...
** package ‘precautionary’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** exec
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘escalation’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘trialr’
Error: package ‘escalation’ could not be loaded
Execution halted
ERROR: lazy loading failed for package ‘precautionary’
* removing ‘/tmp/workdir/precautionary/new/precautionary.Rcheck/precautionary’
CRAN
* installing *source* package ‘precautionary’ ...
** package ‘precautionary’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** demo
** exec
** inst
** byte-compile and prepare package for lazy loading
Error: package or namespace load failed for ‘escalation’ in loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]):
there is no package called ‘trialr’
Error: package ‘escalation’ could not be loaded
Execution halted
ERROR: lazy loading failed for package ‘precautionary’
* removing ‘/tmp/workdir/precautionary/old/precautionary.Rcheck/precautionary’
psychonetrics
- Version: 0.8
- Source code: https://github.com/cran/psychonetrics
- URL: http://psychonetrics.org/
- BugReports: https://github.com/SachaEpskamp/psychonetrics/issues
- Date/Publication: 2020-10-26 21:50:03 UTC
- Number of recursive dependencies: 159
Run cloud_details(, "psychonetrics") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/psychonetrics/new/psychonetrics.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘psychonetrics’ version ‘0.8’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘metaSEM’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/psychonetrics/old/psychonetrics.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘psychonetrics’ version ‘0.8’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘metaSEM’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
RichR
- Version: 1.0.0
- Source code: https://github.com/cran/RichR
- Date/Publication: 2019-02-22 14:00:03 UTC
- Number of recursive dependencies: 39
Run cloud_details(, "RichR") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/RichR/new/RichR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘RichR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RichR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/RichR/old/RichR.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘RichR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘RichR’ version ‘1.0.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘metap’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
ripe
- Version: 0.1.0
- Source code: https://github.com/cran/ripe
- URL: https://github.com/yonicd/ripe
- BugReports: https://github.com/yonicd/ripe/issues
- Date/Publication: 2019-12-06 10:10:02 UTC
- Number of recursive dependencies: 58
Run cloud_details(, "ripe") for more info
Newly broken
- checking whether package ‘ripe’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/ripe/new/ripe.Rcheck/00install.out’ for details.
Installation
Devel
* installing *source* package ‘ripe’ ...
** package ‘ripe’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Error in get("is_pipe", asNamespace("magrittr")) :
object 'is_pipe' not found
Error: unable to load R code in package ‘ripe’
Execution halted
ERROR: lazy loading failed for package ‘ripe’
* removing ‘/tmp/workdir/ripe/new/ripe.Rcheck/ripe’
CRAN
* installing *source* package ‘ripe’ ...
** package ‘ripe’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ripe)
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
NA
- Version: NA
- Source code: https://github.com/cran/NA
- Number of recursive dependencies: 0
Run cloud_details(, "NA") for more info
Error before installation
Devel
CRAN
smartdata
- Version: 1.0.3
- Source code: https://github.com/cran/smartdata
- URL: http://github.com/ncordon/smartdata
- BugReports: http://github.com/ncordon/smartdata/issues
- Date/Publication: 2019-12-18 17:40:02 UTC
- Number of recursive dependencies: 271
Run cloud_details(, "smartdata") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/smartdata/new/smartdata.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘smartdata/DESCRIPTION’ ... OK
* this is package ‘smartdata’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘adaptiveGPCA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/smartdata/old/smartdata.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘smartdata/DESCRIPTION’ ... OK
* this is package ‘smartdata’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘adaptiveGPCA’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
SMITIDvisu
- Version: 0.0.8
- Source code: https://github.com/cran/SMITIDvisu
- URL: https://informatique-mia.inrae.fr/biosp/anr-smitid-project/, https://gitlab.paca.inrae.fr/SMITID/visu/
- Date/Publication: 2020-11-05 11:10:02 UTC
- Number of recursive dependencies: 84
Run cloud_details(, "SMITIDvisu") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/SMITIDvisu/new/SMITIDvisu.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘SMITIDvisu/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SMITIDvisu’ version ‘0.0.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘SMITIDstruct’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/SMITIDvisu/old/SMITIDvisu.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘SMITIDvisu/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘SMITIDvisu’ version ‘0.0.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘SMITIDstruct’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
spectralAnalysis
- Version: 3.12.0
- Source code: https://github.com/cran/spectralAnalysis
- URL: http://www.openanalytics.eu
- Date/Publication: 2018-06-12 14:30:39 UTC
- Number of recursive dependencies: 117
Run cloud_details(, "spectralAnalysis") for more info
Error before installation
Devel
* using log directory ‘/tmp/workdir/spectralAnalysis/new/spectralAnalysis.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘spectralAnalysis/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘spectralAnalysis’ version ‘3.12.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'BiocGenerics', 'NMF'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
CRAN
* using log directory ‘/tmp/workdir/spectralAnalysis/old/spectralAnalysis.Rcheck’
* using R version 3.6.3 (2020-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using options ‘--no-manual --no-build-vignettes’
* checking for file ‘spectralAnalysis/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘spectralAnalysis’ version ‘3.12.0’
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'BiocGenerics', 'NMF'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
torch
- Version: 0.1.1
- Source code: https://github.com/cran/torch
- URL: https://torch.mlverse.org/docs, https://github.com/mlverse/torch
- BugReports: https://github.com/mlverse/torch/issues
- Date/Publication: 2020-10-20 21:10:02 UTC
- Number of recursive dependencies: 58
Run cloud_details(, "torch") for more info
Newly broken
- checking whether package ‘torch’ can be installed ... ERROR
Installation failed. See ‘/tmp/workdir/torch/new/torch.Rcheck/00install.out’ for details.
Newly fixed
- checking installed package size ... NOTE
installed size is 157.6Mb sub-directories of 1Mb or more: R 3.1Mb help 2.8Mb libs 151.2Mb
Installation
Devel
* installing *source* package ‘torch’ ...
** package ‘torch’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c autograd.cpp -o autograd.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c contrib.cpp -o contrib.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cuda.cpp -o cuda.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c device.cpp -o device.o
In file included from device.cpp:2:
torch_types.h:7: warning: "LANTERN_HOST_HANDLER" redefined
7 | #define LANTERN_HOST_HANDLER lantern_host_handler();
|
In file included from device.cpp:1:
lantern/lantern.h:35: note: this is the location of the previous definition
35 | #define LANTERN_HOST_HANDLER
|
In file included from device.cpp:1:
lantern/lantern.h: In function ‘bool lanternInit(const string&, std::string*)’:
lantern/lantern.h:4097:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without
4097 | bool lanternInit(const std::string &libPath, std::string *pError)
| ^~~~~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dimname_list.cpp -o dimname_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dtype.cpp -o dtype.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gen-namespace.cpp -o gen-namespace.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c generator.cpp -o generator.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c indexing.cpp -o indexing.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lantern.cpp -o lantern.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c layout.cpp -o layout.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memory_format.cpp -o memory_format.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nn_utils_rnn.cpp -o nn_utils_rnn.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qscheme.cpp -o qscheme.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c quantization.cpp -o quantization.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reduction.cpp -o reduction.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c save.cpp -o save.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c storage.cpp -o storage.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor.cpp -o tensor.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_list.cpp -o tensor_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_options.cpp -o tensor_options.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c variable_list.cpp -o variable_list.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o torch.so RcppExports.o autograd.o contrib.o cuda.o device.o dimname_list.o dtype.o gen-namespace.o generator.o indexing.o lantern.o layout.o memory_format.o nn_utils_rnn.o qscheme.o quantization.o reduction.o save.o scalar.o storage.o tensor.o tensor_list.o tensor_options.o utils.o variable_list.o -L/usr/lib/R/lib -lR
Renaming torch lib to torchpkg
"/usr/lib/R/bin/Rscript" "../tools/renamelib.R"
installing to /tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/libs
** R
Warning in dir.create(outCodeDir) :
cannot create dir '/tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/R', reason 'No space left on device'
Error in .install_package_code_files(".", instdir) :
cannot open directory '/tmp/workdir/torch/new/torch.Rcheck/00LOCK-torch/00new/torch/R'
ERROR: unable to collate and parse R files for package ‘torch’
* removing ‘/tmp/workdir/torch/new/torch.Rcheck/torch’
CRAN
* installing *source* package ‘torch’ ...
** package ‘torch’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c autograd.cpp -o autograd.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c contrib.cpp -o contrib.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cuda.cpp -o cuda.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c device.cpp -o device.o
In file included from device.cpp:2:
torch_types.h:7: warning: "LANTERN_HOST_HANDLER" redefined
7 | #define LANTERN_HOST_HANDLER lantern_host_handler();
|
In file included from device.cpp:1:
lantern/lantern.h:35: note: this is the location of the previous definition
35 | #define LANTERN_HOST_HANDLER
|
In file included from device.cpp:1:
lantern/lantern.h: In function ‘bool lanternInit(const string&, std::string*)’:
lantern/lantern.h:4097:6: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without
4097 | bool lanternInit(const std::string &libPath, std::string *pError)
| ^~~~~~~~~~~
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dimname_list.cpp -o dimname_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dtype.cpp -o dtype.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c gen-namespace.cpp -o gen-namespace.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c generator.cpp -o generator.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c indexing.cpp -o indexing.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lantern.cpp -o lantern.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c layout.cpp -o layout.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c memory_format.cpp -o memory_format.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nn_utils_rnn.cpp -o nn_utils_rnn.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c qscheme.cpp -o qscheme.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c quantization.cpp -o quantization.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reduction.cpp -o reduction.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c save.cpp -o save.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c scalar.cpp -o scalar.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c storage.cpp -o storage.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor.cpp -o tensor.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_list.cpp -o tensor_list.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tensor_options.cpp -o tensor_options.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.cpp -o utils.o
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -I"/usr/local/lib/R/site-library/Rcpp/include" -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c variable_list.cpp -o variable_list.o
g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o torch.so RcppExports.o autograd.o contrib.o cuda.o device.o dimname_list.o dtype.o gen-namespace.o generator.o indexing.o lantern.o layout.o memory_format.o nn_utils_rnn.o qscheme.o quantization.o reduction.o save.o scalar.o storage.o tensor.o tensor_list.o tensor_options.o utils.o variable_list.o -L/usr/lib/R/lib -lR
Renaming torch lib to torchpkg
"/usr/lib/R/bin/Rscript" "../tools/renamelib.R"
installing to /tmp/workdir/torch/old/torch.Rcheck/00LOCK-torch/00new/torch/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (torch)
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