revdep/failures.md

elbird

Run revdepcheck::cloud_details(, "elbird") for more info

In both

Installation

Devel

* installing *source* package ‘elbird’ ...
** package ‘elbird’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/bin/uname
Prior system libkiwi installation not found
Preparing to download and build library from source...
------------------------------[ ELBIRD ]------------------------------
Configuration failed because 'git' was not found.
If you want to kiwi build from source in package installation prosess,
make sure git and cmake work in system.
-------------------------------------------------------------------------
ERROR: configuration failed for package ‘elbird’
* removing ‘/tmp/workdir/elbird/new/elbird.Rcheck/elbird’


CRAN

* installing *source* package ‘elbird’ ...
** package ‘elbird’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/bin/uname
Prior system libkiwi installation not found
Preparing to download and build library from source...
------------------------------[ ELBIRD ]------------------------------
Configuration failed because 'git' was not found.
If you want to kiwi build from source in package installation prosess,
make sure git and cmake work in system.
-------------------------------------------------------------------------
ERROR: configuration failed for package ‘elbird’
* removing ‘/tmp/workdir/elbird/old/elbird.Rcheck/elbird’


ggPMX

Run revdepcheck::cloud_details(, "ggPMX") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/ggPMX/new/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
  [ FAIL 1 | WARN 14 | SKIP 8 | PASS 327 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
  ‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 ERROR, 2 NOTEs





CRAN

* using log directory ‘/tmp/workdir/ggPMX/old/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
  [ FAIL 1 | WARN 14 | SKIP 8 | PASS 327 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
  ‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 ERROR, 2 NOTEs





immcp

Run revdepcheck::cloud_details(, "immcp") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/immcp/new/immcp.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/immcp/old/immcp.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





ImputeRobust

Run revdepcheck::cloud_details(, "ImputeRobust") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/ImputeRobust/new/ImputeRobust.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ImputeRobust/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ImputeRobust’ version ‘1.3-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘extremevalues’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/ImputeRobust/old/ImputeRobust.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ImputeRobust/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ImputeRobust’ version ‘1.3-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘extremevalues’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







numbat

Run revdepcheck::cloud_details(, "numbat") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/numbat/new/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/numbat/old/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







pathwayTMB

Run revdepcheck::cloud_details(, "pathwayTMB") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/pathwayTMB/new/pathwayTMB.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/pathwayTMB/old/pathwayTMB.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





Platypus

Run revdepcheck::cloud_details(, "Platypus") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/Platypus/new/Platypus.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Platypus/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Platypus’ version ‘3.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking package dependencies ... ERROR
Package required but not available: ‘ggtree’

Packages suggested but not available for checking:
  'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/Platypus/old/Platypus.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Platypus/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Platypus’ version ‘3.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking package dependencies ... ERROR
Package required but not available: ‘ggtree’

Packages suggested but not available for checking:
  'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN







RVA

Run revdepcheck::cloud_details(, "RVA") for more info

Error before installation

Devel

* using log directory ‘/tmp/workdir/RVA/new/RVA.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





CRAN

* using log directory ‘/tmp/workdir/RVA/old/RVA.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR





NA

Run revdepcheck::cloud_details(, "NA") for more info

Error before installation

Devel







CRAN









tidyverse/purrr documentation built on Nov. 7, 2023, 7:33 a.m.