Run revdepcheck::cloud_details(, "elbird")
for more info
Installation failed.
See ‘/tmp/workdir/elbird/new/elbird.Rcheck/00install.out’ for details.
* installing *source* package ‘elbird’ ...
** package ‘elbird’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/bin/uname
Prior system libkiwi installation not found
Preparing to download and build library from source...
------------------------------[ ELBIRD ]------------------------------
Configuration failed because 'git' was not found.
If you want to kiwi build from source in package installation prosess,
make sure git and cmake work in system.
-------------------------------------------------------------------------
ERROR: configuration failed for package ‘elbird’
* removing ‘/tmp/workdir/elbird/new/elbird.Rcheck/elbird’
* installing *source* package ‘elbird’ ...
** package ‘elbird’ successfully unpacked and MD5 sums checked
** using staged installation
/usr/bin/uname
Prior system libkiwi installation not found
Preparing to download and build library from source...
------------------------------[ ELBIRD ]------------------------------
Configuration failed because 'git' was not found.
If you want to kiwi build from source in package installation prosess,
make sure git and cmake work in system.
-------------------------------------------------------------------------
ERROR: configuration failed for package ‘elbird’
* removing ‘/tmp/workdir/elbird/old/elbird.Rcheck/elbird’
Run revdepcheck::cloud_details(, "ggPMX")
for more info
* using log directory ‘/tmp/workdir/ggPMX/new/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
[ FAIL 1 | WARN 14 | SKIP 8 | PASS 327 ]
Error: Test failures
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 ERROR, 2 NOTEs
* using log directory ‘/tmp/workdir/ggPMX/old/ggPMX.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ggPMX/DESCRIPTION’ ... OK
* this is package ‘ggPMX’ version ‘1.2.8’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... NOTE
...
[ FAIL 1 | WARN 14 | SKIP 8 | PASS 327 ]
Error: Test failures
Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... NONE
‘ggPMX-guide.Rmd’ using ‘UTF-8’... OK
* checking re-building of vignette outputs ... OK
* DONE
Status: 1 ERROR, 2 NOTEs
Run revdepcheck::cloud_details(, "immcp")
for more info
* using log directory ‘/tmp/workdir/immcp/new/immcp.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/immcp/old/immcp.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘immcp/DESCRIPTION’ ... OK
* this is package ‘immcp’ version ‘1.0.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "ImputeRobust")
for more info
* using log directory ‘/tmp/workdir/ImputeRobust/new/ImputeRobust.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ImputeRobust/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ImputeRobust’ version ‘1.3-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘extremevalues’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/ImputeRobust/old/ImputeRobust.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘ImputeRobust/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ImputeRobust’ version ‘1.3-1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘extremevalues’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "numbat")
for more info
* using log directory ‘/tmp/workdir/numbat/new/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/numbat/old/numbat.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘numbat/DESCRIPTION’ ... OK
* this is package ‘numbat’ version ‘1.1.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Packages required but not available: 'ggtree', 'scistreer'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "pathwayTMB")
for more info
* using log directory ‘/tmp/workdir/pathwayTMB/new/pathwayTMB.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/pathwayTMB/old/pathwayTMB.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘pathwayTMB/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘pathwayTMB’ version ‘0.1.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "Platypus")
for more info
* using log directory ‘/tmp/workdir/Platypus/new/Platypus.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Platypus/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Platypus’ version ‘3.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking package dependencies ... ERROR
Package required but not available: ‘ggtree’
Packages suggested but not available for checking:
'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/Platypus/old/Platypus.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘Platypus/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘Platypus’ version ‘3.4.1’
* package encoding: UTF-8
* checking package namespace information ... OK
...
* checking package dependencies ... ERROR
Package required but not available: ‘ggtree’
Packages suggested but not available for checking:
'Matrix.utils', 'monocle3', 'ProjecTILs', 'SeuratWrappers'
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "NA")
for more info
Run revdepcheck::cloud_details(, "RVA")
for more info
* using log directory ‘/tmp/workdir/RVA/new/RVA.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
* using log directory ‘/tmp/workdir/RVA/old/RVA.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-manual’
* checking for file ‘RVA/DESCRIPTION’ ... OK
* this is package ‘RVA’ version ‘0.0.5’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package required but not available: ‘clusterProfiler’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
Run revdepcheck::cloud_details(, "NA")
for more info
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