gene_position_data_frame_grch38: Gene position data frames

In timothy-barry/sceptre: Analysis of Single-Cell CRISPR Screen Data

Gene position data frames

Description

gene_position_data_frame_grch38 and gene_position_data_frame_grch37 contain the coordinate and transcription start site position of each gene relative to reference genome GRCh38 and GRCh37, respectively. Both gene_position_data_frame_grch38 and gene_position_data_frame_grch37 were constructed from reference genomes available on the 10x Genomics website. The GRCh38 reference genome has been used by 10x Cell Ranger since 2020.

Usage

data(gene_position_data_frame_grch38)

data(gene_position_data_frame_grch37)

Format

An object of class data.table (inherits from data.frame) with 36572 rows and 4 columns.

An object of class data.table (inherits from data.frame) with 57773 rows and 4 columns.

Examples

head(gene_position_data_frame_grch38)
head(gene_position_data_frame_grch37)

timothy-barry/sceptre documentation built on May 1, 2024, 3:31 p.m.