get_params_for_nextflow: Get params for nextflow

In timothy-barry/simulatr: Design Portable and Scalable Simulation Studies

Get params for nextflow

Description

Given a file path fp, writes all parameters to which nextflow needs access to a plain text file stored at fp.

Usage

get_params_for_nextflow(simulatr_spec, fp, B_in)

Arguments

simulatr_spec	the simulatr_specification object
fp	a file path
B_in	value of B passed to command line; B = 0 indicates no argument passed

Details

Parameters are separated by line. Each line is of the form "param:value," where "param" is the name of the parameter and "value" is its value.

timothy-barry/simulatr documentation built on Sept. 6, 2024, 7:10 p.m.