Rosenbluh2017CRISPRiSim: Simulated data from Rosenbluh et al (2017) Nature...
In timydaley/CRISPhieRmix: A tool for identifying interesting genes in large pooled CRISPRi and CRISPRa screen using hierarchical mixture models
Description
Usage
Format
Source
Examples
Description
A dataset containing DESeq2 computed log2 fold changes for 34 essential genes
and 102 simulated negative genes, as well as negative control guides.
Simulated negative genes have geneIds starting with 'sim'
Usage
1
Format
a list with log2fc = log2 fold changes of gene targetting guides,
geneIds = gene ids of gudies,
negCtrl = log2 fold changes of negative control guides,
and counts = the count matrix
Source
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457492/
Examples
1
timydaley/CRISPhieRmix documentation built on July 13, 2019, midnight
R Package Documentation
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Description Usage Format Source Examples
Description
A dataset containing DESeq2 computed log2 fold changes for 34 essential genes and 102 simulated negative genes, as well as negative control guides. Simulated negative genes have geneIds starting with 'sim'
Usage
1 |
Format
a list with log2fc = log2 fold changes of gene targetting guides, geneIds = gene ids of gudies, negCtrl = log2 fold changes of negative control guides, and counts = the count matrix
Source
https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5457492/
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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