get_score: Bayes scores and mean scores
In tinglabs/reCAT: Reconstructing Cell Cycle Pseudo Time-Series via Single-Cell Transcriptome Data
Description
Usage
Arguments
Examples
Description
This function produces the bayes scores (G1, S, G2/M) and Mean scores (G1, S, G2, M, G1/S, G2/M) over the dataset. The output can then be used to classify different cycle stages using HMM.
Usage
1
get_score(talentDE)
Arguments
data
The data with cycling genes, m genes by n cells
Examples
1
2
test_exp <- get_test_exp(data)
get_score(t(test_exp))
tinglabs/reCAT documentation built on March 16, 2021, 12:08 a.m.
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Description Usage Arguments Examples
Description
This function produces the bayes scores (G1, S, G2/M) and Mean scores (G1, S, G2, M, G1/S, G2/M) over the dataset. The output can then be used to classify different cycle stages using HMM.
Usage
1 | get_score(talentDE)
|
Arguments
data |
The data with cycling genes, m genes by n cells |
Examples
1 2 | test_exp <- get_test_exp(data)
get_score(t(test_exp))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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