ggheatmap: Generate a ggplot2 heatmap with row and column dendrograms
In tleonardi/ggheatmap: Generate pretty ggplot2 heatmaps with row and column dendrograms
Description
Usage
Arguments
Examples
Description
Generate a ggplot2 heatmap with row and column dendrograms
Usage
1
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ggheatmap(dataMatrix, orderCol = T, orderRow = T, dendroLineSize = 0.5,
fontSize = 20, colorScheme = "Spectral", scaleName = "value",
distMethod = "euclidean", clustMethod = "complete")
Arguments
dataMatrix
A data.frame containing the input data.
orderCol
Reorder the columns (default=T)
orderRow
Reorder the rows (default=T)
dendroLineSize
Size of the dendrogram lines (default=0.5)
fontSize
Font size (default=20)
scaleName
Name of the colorscale (default="value")
distMethod
Distance method (default="euclidean", see ?dist)
clustMethod
Clustering method (default="complete", see ?hclust)
colorPalette
Color palette (default="Spectral")
Examples
1
tleonardi/ggheatmap documentation built on May 21, 2019, 12:05 p.m.
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Description Usage Arguments Examples
Description
Generate a ggplot2 heatmap with row and column dendrograms
Usage
1 2 3 | ggheatmap(dataMatrix, orderCol = T, orderRow = T, dendroLineSize = 0.5,
fontSize = 20, colorScheme = "Spectral", scaleName = "value",
distMethod = "euclidean", clustMethod = "complete")
|
Arguments
dataMatrix |
A data.frame containing the input data. |
orderCol |
Reorder the columns (default=T) |
orderRow |
Reorder the rows (default=T) |
dendroLineSize |
Size of the dendrogram lines (default=0.5) |
fontSize |
Font size (default=20) |
scaleName |
Name of the colorscale (default="value") |
distMethod |
Distance method (default="euclidean", see ?dist) |
clustMethod |
Clustering method (default="complete", see ?hclust) |
colorPalette |
Color palette (default="Spectral") |
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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