plot.R0.sR: Plot the R0/Rt value along with confidence interval

In tobadia/R0: Estimation of R0 and Real-Time Reproduction Number from Epidemics

Plot the R0/Rt value along with confidence interval

Description

Generates the graphical output for estimated R or R(t) fits.

Usage

## S3 method for class 'R0.sR'
plot(x, xscale = "w", TD.split = FALSE, ...)

Arguments

x	An output of estimate.R() (class R0.sR)
xscale	Scale to be adjusted on x-axis. Can be d (day), w (week (default)), f (fornight), m (month).
TD.split	Boolean. Parameter to force the display of both R(t) and the epidemic curve in the same window for the TD method.
...	Parameters passed to inner functions.

Details

For internal use. Called by [base::plot())].

Tweaked [base::plot()] function that draws the reproduction number values for each method contained in the object constructed by [estimate.R()].

[base::plot())]: R:base::plot()) [base::plot()]: R:base::plot() [estimate.R()]: R:estimate.R()

Value

This function does not return any data. Called for side effect. Draws all R_{0} or /eqnR(t) values from an output of estimate.R(), built with one or more methods.

Author(s)

Pierre-Yves Boelle, Thomas Obadia

tobadia/R0 documentation built on Sept. 24, 2023, 5:16 p.m.