feature_filter: Filter out features with low counts
In tpall/featurefilter: Filter out non-informative HT-seq read counts
Description
Usage
Arguments
Value
Description
Uses sequence read counts and number of samples per group to filter
out genes with low number of read counts in most samples.
Usage
1
feature_filter(rawcounts, n_samples)
Arguments
rawcounts
counts matrix
n_samples
minimum number of samples passing the filter
Value
logical vector
tpall/featurefilter documentation built on May 29, 2019, 12:07 a.m.
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Description Usage Arguments Value
Description
Uses sequence read counts and number of samples per group to filter out genes with low number of read counts in most samples.
Usage
1 | feature_filter(rawcounts, n_samples)
|
Arguments
rawcounts |
counts matrix |
n_samples |
minimum number of samples passing the filter |
Value
logical vector
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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